Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0126 |
Symbol | |
ID | 3908097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 136074 |
End bp | 137282 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637882008 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_483749 |
Protein GI | 86747253 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGGC GCTTCGCGGT GAAACTGGTC TCGGTCGCGG TGGCATTGAT GGCGAGCGGT TGGCGGGCCG ACGCCGCCGA TCAACCACCG ATCCGGATCG GCGACGTCTC CAGCTATTCG GCTCTGCCGA TCGGCGCCCG TGGCTATCGG CAGGGCTGGG AGCTCGCGCG CGACGAGATC AACGGCAAAG GCGGCGTGCT GGGCCGGCAG CTCCAGATCA TCTCCCGCGA CGACGCCGGC AAGCCCGACG CGGCCATCAC GCAGGCCGCG CAACTGGTCG ACGCGGAGAA CGTGGATCTG CTGACCGGGA CGATCCTCTC CAATGTCGGC CTCGCCGTCT CCGATTTCGC CAAACGGCGG AAGATCTTCT TCCTGGCCTC GCAGCCCCTG ACCGACGCGC TGATCTGGGA CAAGCGCAGC CGCTACACTT ACCGGCTGCG GCCTTCGACC TACACCCAGA CCACCATCCT GGCCCAGGAA GCCGCCAAGC TGCCGGCGCG GCGCTGGGCC ACGATCGCAC CCAACTACGA GTTCGGGCAG GCGGCCGTCT CCAACTTCAA GCAGGAATTG CGGCGACTCC GACCTGATGT CGAGTTCATT TCCGAGCAAT GGCCGCCGCT CGGCAAGATC GATGCGGGCT CGGTCGTGCA GGCGATGGCC GCCGATAACC CGGAGGCGAT CTTCAACGTC ACCTTCGGGT CCGATCTCGC CCGGCTGGTG CGGGAGGGAA CCACGCGCAA GACGTTTGCG AACCGCACCG TCGTCAGCCT CCTGACCGGC GAGCCGGAAT ATCTGGCGCC GCTGAAGGAC GAGGCGCCCG AGGGATGGAT CGTGACCGGC TATCCGTGGA ACGAGATCGC GACGCCAGAG CACCGCGCCT TCGTCGAGGC CTATCGGGCG CGCTTCAAGG ATGCGCCGAA CATCGGTGCG CTGATCGGCT ACATCAACAC GCTGGTGCTC GCCAAAGCGA TCGAAACCGC CGGCTCGACC GAGACCGAAG CGCTTCTCGC GGCGATGGAG CACTTGAAAA TCGACACGCC GTGCGGGCCG ATCTCGTTCC GTGCCGTCGA CCATCAGTCC ACGCTGGGCA TCTACATCGG CAAGCTGGCG GTGAGGGATG GCCAGGGGGT GATGACCGAC TGGCGTTATG TCGACGGCGC CACTCACCAG CCGTCGGACG CCGACGTTCT GGCCAAAATC AAAGAGTAG
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Protein sequence | MAGRFAVKLV SVAVALMASG WRADAADQPP IRIGDVSSYS ALPIGARGYR QGWELARDEI NGKGGVLGRQ LQIISRDDAG KPDAAITQAA QLVDAENVDL LTGTILSNVG LAVSDFAKRR KIFFLASQPL TDALIWDKRS RYTYRLRPST YTQTTILAQE AAKLPARRWA TIAPNYEFGQ AAVSNFKQEL RRLRPDVEFI SEQWPPLGKI DAGSVVQAMA ADNPEAIFNV TFGSDLARLV REGTTRKTFA NRTVVSLLTG EPEYLAPLKD EAPEGWIVTG YPWNEIATPE HRAFVEAYRA RFKDAPNIGA LIGYINTLVL AKAIETAGST ETEALLAAME HLKIDTPCGP ISFRAVDHQS TLGIYIGKLA VRDGQGVMTD WRYVDGATHQ PSDADVLAKI KE
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