Gene RPB_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0116 
Symbol 
ID3908087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp126415 
End bp127803 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content70% 
IMG OID637881998 
Productcytochrome P450 
Protein accessionYP_483739 
Protein GI86747243 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2124] Cytochrome P450 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATCG CCGAAGTCTA CGCTGTCGCT GATCGTCCTG CGCCGCTGGT GCCGCCGACG 
CCGCCACGCG CGCCGGAAAA TATCTCGGCG CTCGGCCGGC TCGCGGCGAT CCGCCGCAAT
GCGATCGCGA GCTGGGGCGC GCGAGCCTAT CAGGACGACA TCGTCAAGGG CAGGTTCTTC
ACTCACGCCA GCTACATCCT CAATACGCCC GATGCGATCC GGCATGTGCT GGTCGACAAC
GACGAGAACT ACACCCGCAC CGCGACGGGC ATCCGCGTGC TGCAGCCGAT GCTCGGCGAA
GGCCTGCTGC TGGCGCAGGG CCGCGTCTGG AAGCATCAGC GCCGCACGCT GGCGCCGGCG
TTCACGCCGC GCGCCGTCGG CACGCTGGTG CCGCATATGA TCTCGGCCAC CGAGGAGACC
GTCGCCGAAC TGCGCGACAG CGCCGGCGCG CCGGTCGACC TGCGCGAGAA GATGCAGCAT
CTGGCGCTGG AGATCGCCGG GCGGACGATG TTCTCGTTCG AGATGGGCAG CCACGGCAAG
GCGCTGCGTG ATTTCGTCAT CGAGTACGGC ACCAGACTCG CGAGCCCGCG ATTTCTCGAT
CTGCTGCTGC CGCTCGGTTG GCCGACGCCG CAGGATATTT CCCGCGCGTT CTTTCGCCGG
CGCTGGACCA AATTCGTCGG CGAACTGATC GCCGCCCGCC GCGCCGCCGG CAAGGGCGAA
GGCGCGCCGC CGCGCGATCT GTTCGACCTG ATGGTCGCGG CGCGCGATCC CGAGACCGGC
GAGGCGTTCT CCGATGATCA GCTCGGCGAT CAGGTCGCGA CGATGATTCT CGCCGGCCAC
GAGACCACCG CGACCGCGTT GTTTTGGGCT TTGTATCTGC TGGCGCTCGA TCCGCGCACC
CAGGACGACC TCGCGGACGA AGTCCGCGCC GCCGGCAGCG GCGAAACGCC TGCGCTCGAC
CGGCTGCCCT TCACCCGCGC GGTGCTCGAC GAAACGTTGC GGCTGTATCC GCCGGCGTTC
CTGATCGCGC GCGAGGCCGC CGGCCCCGAC ACCGTCGCCG GCCACGCCAT CCACCGCCAC
GACGTGTTGC TGATCGCGCC GTGGCTGCTG CACCGGCACG AGAAGCTGTG GGACAATCCC
TCCGCCTTCA TGCCGTCGCG CTTCCTGCCG GGCGCGCCGC CGCCGGATCG CTTCGCCTAT
CTGCCGTTCG GCGTCGGCCC GCGGATCTGC ATCGGTGCGC ATTTTGCGCT GGTCGAGGCG
ACGCTGGCGC TGGCCCGGGT CGTCGGCGCG TTCCGGATCG AACTGATCGA CGCCGCGCCG
GTGATGCCGA TCGGCATCGT CACCACCCAG CCGGACCGCT CGCCGATGTT CAGGCTCACG
CGCCGGTGA
 
Protein sequence
MSIAEVYAVA DRPAPLVPPT PPRAPENISA LGRLAAIRRN AIASWGARAY QDDIVKGRFF 
THASYILNTP DAIRHVLVDN DENYTRTATG IRVLQPMLGE GLLLAQGRVW KHQRRTLAPA
FTPRAVGTLV PHMISATEET VAELRDSAGA PVDLREKMQH LALEIAGRTM FSFEMGSHGK
ALRDFVIEYG TRLASPRFLD LLLPLGWPTP QDISRAFFRR RWTKFVGELI AARRAAGKGE
GAPPRDLFDL MVAARDPETG EAFSDDQLGD QVATMILAGH ETTATALFWA LYLLALDPRT
QDDLADEVRA AGSGETPALD RLPFTRAVLD ETLRLYPPAF LIAREAAGPD TVAGHAIHRH
DVLLIAPWLL HRHEKLWDNP SAFMPSRFLP GAPPPDRFAY LPFGVGPRIC IGAHFALVEA
TLALARVVGA FRIELIDAAP VMPIGIVTTQ PDRSPMFRLT RR