Gene RPB_0109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0109 
Symbol 
ID3909695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp120210 
End bp120536 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content69% 
IMG OID637881990 
Producthypothetical protein 
Protein accessionYP_483732 
Protein GI86747236 
COG category[S] Function unknown 
COG ID[COG1872] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00251] conserved hypothetical protein TIGR00251 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.540517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG CCTGGCGGTA TTCTGCCCAG GGTGTCGCCG TCGCGGTGCG GGTCACGCCA 
CGCGGCGATC GCGACGAGAT TGATGGGCTG GAAACGTTGT CGGACGGCCG GCCCGTGGTG
AAGCTGCGGG TTCGCGCCAT CGCCGATGGC GGCGAGGCCA ACCGGGCGGT GATCGAGCTG
TTGGCCAAGG CGCTCGGCGT GCCGAAACGC AACGTCCGGC TGTTATCGGG GGCGACGTCG
CGGCAGAAGC AGATAGCCAT CGACGGCGAT CCCAAGAGCC TCGGCGAGAC GCTTCGTCAG
CTCACGGCGG CGAAGCCGGC CGGGTAA
 
Protein sequence
MAEAWRYSAQ GVAVAVRVTP RGDRDEIDGL ETLSDGRPVV KLRVRAIADG GEANRAVIEL 
LAKALGVPKR NVRLLSGATS RQKQIAIDGD PKSLGETLRQ LTAAKPAG