Gene RPB_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0108 
Symbol 
ID3909694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp119224 
End bp120111 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content67% 
IMG OID637881989 
Productbifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 
Protein accessionYP_483731 
Protein GI86747235 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.55778 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCCA CGATCATCGA CGGAAAAATC ATCTCGGCCG AGCTGCGCGC GCGGGTGGCC 
GCGGAGGTGA CGCGAATCAA GGCCGATCAC GGCATCACGC CGGGGCTCGC GGTGGTGCTG
GTCGGCAGCG ATCCGGCCTC CGAGGTCTAT GTCCGCAGCA AGCACAAGCA GACCCAGGAG
GCCGGCATGG CCTCGTTCGA GCACCGGCTG CCGGCCGATG TGCCGCAGGC CGAGCTGCTG
GCGCTGATCG GCCAGCTCAA TGCCGATCCG GCGGTGCACG GAATCCTGGT GCAGTTGCCG
TTGCCGAAGG GGCTGGACAG CAATGCGGTG ATCGATGCGA TCGATCCTGC CAAGGACGTC
GACGGCCTCA ATCCGGTCAA TGCCGGCCGG CTGGCCTCCG GGCTGTTCGC GCTGACGCCG
TGCACGCCGC TCGGCTGCAT CATCATGGCC AAGCAGGTGC ATGCCTCGCT GGAAGGCATG
AATGCCATCG TGATCGGCCG CTCCAATCTG GTCGGCAAGC CGCTGGTGCA ATTGCTGCTC
AACGAGAACG CCACCGTGAC GATCGCGCAT TCGCGCTCGC GCGATCTGCC GGCGCTGTGC
CGGCAGGCCG ATCTCGTGTT CGCCGCGGTC GGCAGGCCCG AGATGGTGAA AGGCGACTGG
ATCAAGCCGG GCGCGACCGT GATCGATGTC GGCATCAACC GCACGCCGTC GCCGGACGGC
GGCAAGGACA AGCTCGTTGG TGACGTCGCC TTTGCCGAAG CCAAGGACAT CGCCGGCGCC
ATCACCCCGG TGCCGGGCGG CGTCGGCCTG ATGACGGTGG CGTGCCTCCT GGTCAACACC
GTCCGCGCCG CCAGCGCGAT TCACGGCTTG CCGAAGCCGG CCGTCTAA
 
Protein sequence
MTATIIDGKI ISAELRARVA AEVTRIKADH GITPGLAVVL VGSDPASEVY VRSKHKQTQE 
AGMASFEHRL PADVPQAELL ALIGQLNADP AVHGILVQLP LPKGLDSNAV IDAIDPAKDV
DGLNPVNAGR LASGLFALTP CTPLGCIIMA KQVHASLEGM NAIVIGRSNL VGKPLVQLLL
NENATVTIAH SRSRDLPALC RQADLVFAAV GRPEMVKGDW IKPGATVIDV GINRTPSPDG
GKDKLVGDVA FAEAKDIAGA ITPVPGGVGL MTVACLLVNT VRAASAIHGL PKPAV