Gene RPB_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0106 
Symbol 
ID3909692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp116996 
End bp117532 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content61% 
IMG OID637881987 
Productinorganic pyrophosphatase 
Protein accessionYP_483729 
Protein GI86747233 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTG ACGCAATTCC CGTCGGCATC AACCCACCCC ACGATGTCAA CGTGATCATC 
GAGGTTCCGG TCGGCGGCGA GCCGATCAAA TACGAGATGG ACAAGGACGC CGGCACGCTG
GTGGTCGATC GGTTTCTTTA TACCGCCATG CGCTATCCCG GGAATTACGG CTTCATTCCG
CATACGCTGT CCGACGACGG CGACCCCTGC GACGTGCTGG TCGCCAACAC CCGCGGCATC
GTGCCGGGCG CGATGATGAG CGTGCGGCCG GTCGGCGTGC TGTTCATGAG CGACGAGGCC
GGCCACGACG AGAAGATCAT CGCGGTGCCG TCGTCGAAGC TGACTCAGCG CTACGACCGC
ATCAAGACCT ATTCCGACCT GCCCGAAATC ACGCTGCAGC AGATCCAGCA CTTCTTCGAG
CACTACAAGG ATCTCGAACC CGGCAAATGG GTGAAGATCC TGCGCTGGGG GGGCGCCGAG
GATGCGCACA AGCTGATCGT CGAAGGCATC GAGCGGGCCA AGGCCGCAAA GAAATAA
 
Protein sequence
MRIDAIPVGI NPPHDVNVII EVPVGGEPIK YEMDKDAGTL VVDRFLYTAM RYPGNYGFIP 
HTLSDDGDPC DVLVANTRGI VPGAMMSVRP VGVLFMSDEA GHDEKIIAVP SSKLTQRYDR
IKTYSDLPEI TLQQIQHFFE HYKDLEPGKW VKILRWGGAE DAHKLIVEGI ERAKAAKK