| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0103 |
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| Symbol | |
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| ID | 3909689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | + |
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| Start bp | 113015 |
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| End bp | 114838 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637881984 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_483726 |
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| Protein GI | 86747230 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.101751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTC GTAACATCGC CATTATCGCA CACGTCGACC ACGGCAAGAC CACCCTCGTC
GACAAGCTGC TGCAGCAGTC CGGCACCTAT CGCGACAACC AGCGCCAGGT CGAACGGGCG
ATGGACTCCA ACGATCTCGA GCGCGAGCGC GGCATCACCA TTCTGGCCAA GTGCACCTCG
GTGGTGTGGG ACGACACGCA CATCAATATC GTCGACACCC CCGGCCACGC CGATTTCGGC
GGCGAGGTCG AACGCATCCT GTCGATGGTC GACGGCGTGA TCGTGCTGGT CGACGCCGCC
GAAGGCCCGA TGCCGCAGAC CAAATTCGTG GTCGGCAAGG CGCTGAAGCT CGGCCTCAAG
CCGATCGTCG CGATCAACAA GGTCGACCGC TCCGACGCCC GCGTCACCGA AGTCGTCAAC
GAAGTCTTCG ACCTGTTCGC CGCACTGGAC GCCACCGACG ATCAGCTCGA CTTCCCGATC
CTGTACGGCT CGGGCAAGAA CGGCTGGATG TCGGACAAGC CCGACGGCAG CCACGAGGAC
GGCATGCGGC CGCTGTTCGA ACTCGTGCTC AAGCACGTCC CGCCGCCGGC GGTGGAAGAA
GGCCCGTTCC GTCTGCTCGG CACCATCCTC GAAGCCAACC CCTATCTCGG CCGCATCATC
ACCGGCCGGA TCGCGTCGGG CTCGGTCAAG CCGAACCAGA GCGTCAAGGT GCTGTCGCGT
GACGGCAAGC TGGTCGAGAC CGGCCGCATC ACCAAGATCC TCGCTTTCCG CGGCCTCGAG
CGCGTGCCGC TCGACATCGC CGAAGCCGGC GACATCGTCG CCATCGCGGG CCTCACCAAG
GGCACCGTCG CCGACACCTT CTGCGACCCG TCGGTCGACA CCCCGATCCA GGCCCAGCCG
ATCGATCCGC CGACCGTGTC GATGTCGTTC ATCGTCAACA ACTCGCCGCT CGCCGGCACC
GAAGGCGACA AGGTCACCAG CCGCCTGATC CGCGACCGCC TGCTGCGCGA AGCCGAAGGC
AACGTCGCGC TGCGCGTCGT CGAGGCCGCC GACAAGGACG CGATGGAAGT GTCGGGCCGC
GGCGAATTGC AGCTCGCGAT CCTGATCGAG AACATGCGCC GCGAGGGTTT CGAACTCAGC
GTGTCGCGTC CGCGCGTCGT CCTGACCCGC GACGAAGACG GCCAATTGCT AGAGCCGATC
GAGGAAGTCG TGGTCGACGT CGACGAGGAA TTCTCCGGCG TCGTCGTGCA GAAGATGAGC
GAGCGCAAGG CCGAGATGAT CGAGATGCGC CCGTCCGGCG GCAATCGTCT GCGGCTGGTG
TTCTACGCGC CGACCCGCGG CCTGATCGGC TATCAGGGCG AACTGATGAC CGACACCAAG
GGCACGGCGA TCATGAACCG GCTGTTCCAC AACTACCTGC CGTATCGCGG CGAGATCCAG
GGCCGCCGCA ACGGCGTGCT GATCTCCAAC GATCAGGGCG AGGCGGTCGC CTACGCGATG
TTCAAGCTGG AAGACCGCGG CCCGATGATG ATCGAGCCCG GCTGGAAGGT CTACAAGGGC
ATGATCGTCG GCGAGCACAC CCGCGACAAC GATCTCGAGA TCAACGTGCT CAAGGGCAAG
CAGCTCACCA ACATCCGCAC CACCTCGAAG GACGAGGCGG TCCGCCTCAC CCCGCCGATC
CGGATGACGC TGGAAAAGGC GCTGGCCTAT ATCGAGGAAG ACGAGCTGGT CGAGATCACG
CCGAAATCGA TCCGCCTGCG CAAGCGCCAT CTCGACGCCA ACGAGCGCAA GCGCGCCGAG
AAGTCGAAGC AGGCGGTCGC CTGA
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| Protein sequence | MTLRNIAIIA HVDHGKTTLV DKLLQQSGTY RDNQRQVERA MDSNDLERER GITILAKCTS
VVWDDTHINI VDTPGHADFG GEVERILSMV DGVIVLVDAA EGPMPQTKFV VGKALKLGLK
PIVAINKVDR SDARVTEVVN EVFDLFAALD ATDDQLDFPI LYGSGKNGWM SDKPDGSHED
GMRPLFELVL KHVPPPAVEE GPFRLLGTIL EANPYLGRII TGRIASGSVK PNQSVKVLSR
DGKLVETGRI TKILAFRGLE RVPLDIAEAG DIVAIAGLTK GTVADTFCDP SVDTPIQAQP
IDPPTVSMSF IVNNSPLAGT EGDKVTSRLI RDRLLREAEG NVALRVVEAA DKDAMEVSGR
GELQLAILIE NMRREGFELS VSRPRVVLTR DEDGQLLEPI EEVVVDVDEE FSGVVVQKMS
ERKAEMIEMR PSGGNRLRLV FYAPTRGLIG YQGELMTDTK GTAIMNRLFH NYLPYRGEIQ
GRRNGVLISN DQGEAVAYAM FKLEDRGPMM IEPGWKVYKG MIVGEHTRDN DLEINVLKGK
QLTNIRTTSK DEAVRLTPPI RMTLEKALAY IEEDELVEIT PKSIRLRKRH LDANERKRAE
KSKQAVA
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