Gene RPB_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0090 
Symbol 
ID3908732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp96815 
End bp98152 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content65% 
IMG OID637881971 
Productargininosuccinate synthase 
Protein accessionYP_483713 
Protein GI162138526 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.698151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACGA TTCTGAAAAG CCTGCCCAAA GGCGAAAACG TCGGCATCGC GTTTTCGGGC 
GGGCTCGACA CCAGCGCGGC GCTGCTGTGG ATGAAGCAGA AGGGCGCTCG CGTGTTCGCC
TATACGGCGA ATCTCGGCCA GCCCGACGAG GCCGACTACG ACGAGATCCC GCGCAAGGCG
ATGGAGTTTG GCGCCGAGAA GGCCCGGCTG GTCGATTGTC GGTCGCAGCT CGTGCACGAG
GGCATCGCCG CGATCCAGTC GGGCGCCTTC CACGTCTCGA CCGGCGGCAT CGCCTATTTC
AACACCACGC CGCTCGGCCG CGCCGTCACC GGCACCATGC TGGTCTCGGC GATGAAGGAG
GACGGCGTCA ATATCTGGGG CGACGGCTCG ACCTACAAGG GCAACGATAT CGAGCGGTTC
TATCGCTACG GGCTGCTGAC CAACCCGGAC CTGCGGATCT ACAAGCCCTG GCTCGATCAG
CAGTTCATCG ACGAGCTCGG CGGCCGCGCC GAAATGTCGG CGTTCATGAC CGCCGCCGGC
TTCGCCTACA AGATGAGTTC GGAAAAGGCG TATTCGACCG ACAGCAACCT GCTCGGCGCC
ACCCACGAGG CCAAGGATCT CGAACACCTC GATTCAGGCA TCAGGATCGT CGTCCCGATC
ATGGGCGTGC CGTTCTGGCG CGAGGATTGC GCTGTCAAGG CCGAGACCGT CTCGGTGCGG
TTCGAGGAAG GCCAGCCGGT CGCGCTGAAC GGCAAGACGT TCGCCGATCC GGTCGCGCTG
TTCCTCGAGG CCAATGCGAT CGGCGGCCGG CACGGGCTCG GCATGAGCGA CCAGATCGAG
AACCGCATCA TCGAGGCCAA GAGCCGCGGC ATCTACGAGG CGCCGGGCAT GGCGCTGCTG
CACATCGCCT ATGAGCGTCT CGTCACCGGC ATCCACAACG AAGACACCAT CGAGCAGTAT
CGCATCAGCG GCATGAAGCT CGGCCGCCTG CTGTATCAGG GTCGCTGGTT CGACTCGCAG
GCCTTGATGC TGCGCGAGAC GGCGCAGCGC TGGGTGGCGC GCGCCATCAC CGGCGAGGTC
ACGCTCGAGC TGCGCCGCGG CAACGACTAC TCGATCCTCA ACACGCAGAG CCCGAATCTG
ACCTATGCGC CGGAGCGGCT CAGCATGGAG AAGGTCGAGG ACGCGCCGTT CACGCCGGGC
GATCGCATCG GCCAGCTGAC GATGCGCAAC CTCGATATCG CCGACACCCG CGCCAAGCTG
GACATCTTCG CCAAGGCCGG CCTGCTGTCG GCCGGCGAGG GCTCGCACAT CCCGAAGCTC
GAAAACGACA AGGGCTGA
 
Protein sequence
MSTILKSLPK GENVGIAFSG GLDTSAALLW MKQKGARVFA YTANLGQPDE ADYDEIPRKA 
MEFGAEKARL VDCRSQLVHE GIAAIQSGAF HVSTGGIAYF NTTPLGRAVT GTMLVSAMKE
DGVNIWGDGS TYKGNDIERF YRYGLLTNPD LRIYKPWLDQ QFIDELGGRA EMSAFMTAAG
FAYKMSSEKA YSTDSNLLGA THEAKDLEHL DSGIRIVVPI MGVPFWREDC AVKAETVSVR
FEEGQPVALN GKTFADPVAL FLEANAIGGR HGLGMSDQIE NRIIEAKSRG IYEAPGMALL
HIAYERLVTG IHNEDTIEQY RISGMKLGRL LYQGRWFDSQ ALMLRETAQR WVARAITGEV
TLELRRGNDY SILNTQSPNL TYAPERLSME KVEDAPFTPG DRIGQLTMRN LDIADTRAKL
DIFAKAGLLS AGEGSHIPKL ENDKG