Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0082 |
Symbol | |
ID | 3908724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 84920 |
End bp | 86704 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637881963 |
Product | gamma-glutamyltransferase |
Protein accession | YP_483705 |
Protein GI | 86747209 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0405] Gamma-glutamyltransferase |
TIGRFAM ID | [TIGR00066] gamma-glutamyltranspeptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.437082 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGACA GCACAACACT TGCACCGTCG GAAACCCCGC CCCGTACGAT GACGATGCTT CATCGCAAAG CCGTGACAGC GCTGGTTGCA ATGGTCGCGC TGGTCGTGGT CCCGGCCACC GCCCCGGCAC AGGACATGCG CGGCGGCGCC GCGCGGGCGC CGGGTGCGGC CTCCGCCGTC GTCGCCCGAC ACGGCATGGT GGTGGCGCAG GAGCGGCTCT CGGCGGAAGT GGGGGCGCGC TTTCTCGCGC GCGGCGGCAA CGCGATCGAT GCCGCGGTCG CGACCGGCTT CGCGATGGCG GTGACCTATC CGCGCGCCGG CAATCTCGGC GGCGGCGGCT TCATGCTGAT CCACGCCGCC GCCAGGAACG AGGACGTCGC GATCGACTAT CGCGAGACCG CGCCGCAGGC CGCCACCCGC GAGATGTTCC TCACCGACGG CAAGCCCGAT CCGGACAAGT CCCGCCGATC CGCGCTCGGC ATCGGCGTCC CCGGCACGGT CGCGGGTCTG GCGCTGGCGC TCGACAAATA CGGCTCCGGC AAGTTCTCGC TCGCCGAGGT GATTGCGCCC GCCATCGCGC TCGCGCGCGA CGGCATCAGC GTCGCCGACG ACACCGCCGA CACGCTGCCG GACTGGCATC CCTGGCTGTC GCGCTGGCCG TCGACGCGCA AGATCTTCGC CCGGCCCGAC GGCTCGCCGC TGCGCGAGGG CGACCGGCTG GTGCAGCCCG ACCTCGCCGC GACGCTGCAG GCGATCGCAG ATCACGGCCC CGACGGCTTC TATCGCGGCG GCGTCGCGGA CAAACTGGCG CGCGGCATTC GGGACGCCGG CGGGATCATC ACGACGGATG ATCTGGCGAA CTATCAGGCC ATCGTCCGCG CGCCCGTCCG CGGCAACTAT CGCGGCTACG ACATCGTGGC GATGCCGCAG CCGTCGTCGG GCGGCGTGGT GCTGATCGAG ACGCTGAACA TCCTCGAAGG TTTTCCGATG CCGTCGCTAG AGCAGGGCAG CGCGCCGTCG CTGCATCTGC TGATCGAGGC GATGAAGCGC GCCTATGCGG ATCGCGCCCG CTATCTCGGC GATCCGGCCT ATGTCGACGC GCCACTGTCG ACGCTGCTGT CGAAGGACTA TGCGGCGACA CTGCGTGCGG GCATCGACGC CGACCGCGCC ACGCCTGCCG TCGTCGCGCC GCCGCAGCCG AAGGAGGGCG AGAACACCAC GCACTATTCC GTCGCCGACG ATCAGGGCAA CGCCGTCAGC AACACCTATA CGCTGAATTT CTCCTATGGG GTGGGCCTCG TCGCCGACGG CACCGGCGTG CTGCTCAACA ACGAGCTCGA CGATTTCACC GCGGCGCCCG GCGCGGCGAA CGCCTATGGG CTGGTCGGCT TCGGCGCCAA TCTGCCGGCG CCCGGCAAGC GGCCGCTGTC GTCGATGTCG CCGACCATCG TGCTGAAGGA CGGCAAACCG GTGCTGGTCA CCGGCTCGCC GGGCGGCAGC CGGATCATCT CGGCGACCCT GCAGGTGATC GTCAATGTGC TCGACTATCG CATGAACATC GCCGCCGCTG TCGGCGCGCC GCGGCTGCAT CATCAATGGC TGCCGGACGA GCTCCGCGTC GAGCAAGGCT TTCCGGACGC GACGCTGGAT GCGTTGCGCG CGATGGGCCA CCGCATCGCC ACGCCGCTCG GCCAGACCTC GGCGAACAGC ATCGTCATCG ACGCCGACGG CTTCCACGGC GCCCCCGATC CCCGCACCCG CGGCGCCACG GCGGCCGGCA ACTAG
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Protein sequence | MQDSTTLAPS ETPPRTMTML HRKAVTALVA MVALVVVPAT APAQDMRGGA ARAPGAASAV VARHGMVVAQ ERLSAEVGAR FLARGGNAID AAVATGFAMA VTYPRAGNLG GGGFMLIHAA ARNEDVAIDY RETAPQAATR EMFLTDGKPD PDKSRRSALG IGVPGTVAGL ALALDKYGSG KFSLAEVIAP AIALARDGIS VADDTADTLP DWHPWLSRWP STRKIFARPD GSPLREGDRL VQPDLAATLQ AIADHGPDGF YRGGVADKLA RGIRDAGGII TTDDLANYQA IVRAPVRGNY RGYDIVAMPQ PSSGGVVLIE TLNILEGFPM PSLEQGSAPS LHLLIEAMKR AYADRARYLG DPAYVDAPLS TLLSKDYAAT LRAGIDADRA TPAVVAPPQP KEGENTTHYS VADDQGNAVS NTYTLNFSYG VGLVADGTGV LLNNELDDFT AAPGAANAYG LVGFGANLPA PGKRPLSSMS PTIVLKDGKP VLVTGSPGGS RIISATLQVI VNVLDYRMNI AAAVGAPRLH HQWLPDELRV EQGFPDATLD ALRAMGHRIA TPLGQTSANS IVIDADGFHG APDPRTRGAT AAGN
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