| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0080 |
|---|
| Symbol | |
|---|
| ID | 3908722 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 82852 |
|---|
| End bp | 83667 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637881961 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483703 |
|---|
| Protein GI | 86747207 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.141952 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGCT GCCTTGCCGC CTTCGTCGCG TTGTTCGCCG TGCTGTCGTC GCCGGCGCTG
GCCGAGGACG GCTTCCGCGG CAGCGAGTGT CTGGCGATGG CGCAAGCGCC GCCGCGCGCG
GTGCCGGTCA GCCTGCGGCG GACGGCTGCG GCCGAGCAGG TGCTGATCAC CTATCGCGGG
CACTCGACCT ACACGATCGA AACCCCCGGC GGCGTGATGA TCGCCACCGA CTACAACGGC
GCCTACGCTA CCGGCCGCGT ACCGGACGTC GTCACCATGA ACCGCGCGCA TTCGACGCAC
TACACGCTGG CGCCCGACCC GAAGATCGCG CATGTGCTGC ACGGCTGGGG CGACGACGGC
CAGCCGGCGC ATGTCCGGTT GCGCGTCGGC GACGTGATGA TCCGCAACGT CACCACCGAC
ATCCGCCGCT ATATGTTCGA CGACGGCAAT GCCGGCATGA TCAAGGACGG CAATTCGATC
TTCATCTTCG AGGTCGCGGG CCTGTGCATC GGCCATCTCG GTCATCTGCA CACCACGCTC
GACGACAGCC ATTTCGCCGC GATCGGCCGG ATCGACATTC TGATGGTGCC GATCGACGGC
AGCTACACGA TGTCGCTCGA TGGCATTTCG GCGATCACCA AGCGGCTGCG CGCCGCGGTG
GTGCTGCCGA TGCACCGCTT CATGACGCCG CTCGACGAGT TCATGCGGCG CATCGGCCAA
TCGTTCGCGA TCGATCAGCG CGGCGACAGC GCCCTGCGGA TATCGCGGGA GACACTGCCG
GGCGCGCCGA CGGTGATCAT TCTGCGGGGG GTATAG
|
|---|
| Protein sequence | MLRCLAAFVA LFAVLSSPAL AEDGFRGSEC LAMAQAPPRA VPVSLRRTAA AEQVLITYRG
HSTYTIETPG GVMIATDYNG AYATGRVPDV VTMNRAHSTH YTLAPDPKIA HVLHGWGDDG
QPAHVRLRVG DVMIRNVTTD IRRYMFDDGN AGMIKDGNSI FIFEVAGLCI GHLGHLHTTL
DDSHFAAIGR IDILMVPIDG SYTMSLDGIS AITKRLRAAV VLPMHRFMTP LDEFMRRIGQ
SFAIDQRGDS ALRISRETLP GAPTVIILRG V
|
|---|
| |