Gene RPB_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0062 
Symbol 
ID3907802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp65088 
End bp65918 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content63% 
IMG OID637881943 
Producthypothetical protein 
Protein accessionYP_483685 
Protein GI86747189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATCGC TGATCGACAG CCTCGAACTC GGCCGCGGCA TCGCCTGGCA TCGCATCGCC 
GCGATGGTGC TGCGCTATTG GTACCTTCTG ATGTCGTCGT GGCCGCGGCT GCTCGAGCTG
GTGTACTGGC CGGCGCTGCA GATCATCACC TGGGGCTTTC TGCAGAGCTA CATCGCGGAC
AATGCCGGGT TCTTCGCCCG CGCCGGCGGC ACGCTGATCG GCGCGGTGAT CCTGTGGGAC
ATCCTGTTCC GCGGCCAGCT CGGCTTCTCG ATCTCGTTTC TGGAAGAGAT GTGGGCGCGC
AATCTCGGCA ACCTGATGAT GAGCCCGCTG AAGCCGATCG AATTCCTGGC GGCGCTGATG
ATCATGAGCC TGGTGCGGCT GGCGATCGGC ATCATCCCGA TGGCGCTACT GGCGATGATC
TTCTTCGACT TCAACCTGCT CGGCTTCGGC CTGCCGCTGA TCGCCTTCTT CTGCAACCTG
ATCTTCACCA GCTGGGCGCT CGGCATCTTC GTCTCCGGCC TGGTGCTGCG CAACGGGCTC
GGCGCCGAGA GCATCGTCTG GACGCTGATG TTCGCGGTGA TGCCGCTCGC CTGCGTGTAC
TATCCGGTGT CGGTGCTGCC GCATTGGCTG CAGCCGATCG CCTGGGCGCT GCCGCCGACC
TACGTGTTCG AAGGCATGCG GGCGCTGCTG ATGCAGCATC AGTTCCGCGC CGACCTGATG
CTGTGGTCGC TGGCGCTGAA TGCTGTCCTG TTCGCGGCCT CGTTCGTGAG CTTTCTGGTG
ATGCTGAACA GTGCACGGCG GCACGGATCG TTAATTCAAA GCGGCGAATA G
 
Protein sequence
MRSLIDSLEL GRGIAWHRIA AMVLRYWYLL MSSWPRLLEL VYWPALQIIT WGFLQSYIAD 
NAGFFARAGG TLIGAVILWD ILFRGQLGFS ISFLEEMWAR NLGNLMMSPL KPIEFLAALM
IMSLVRLAIG IIPMALLAMI FFDFNLLGFG LPLIAFFCNL IFTSWALGIF VSGLVLRNGL
GAESIVWTLM FAVMPLACVY YPVSVLPHWL QPIAWALPPT YVFEGMRALL MQHQFRADLM
LWSLALNAVL FAASFVSFLV MLNSARRHGS LIQSGE