Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0054 |
Symbol | |
ID | 3908140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | - |
Start bp | 56021 |
End bp | 56614 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881935 |
Product | hypothetical protein |
Protein accession | YP_483677 |
Protein GI | 86747181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATTG AGACGCCATC GACGACGAAA GCGATGCTGA TGTCGCTCGG CCTCGCCACC CTCGCCGCGA CGCCGGCGTC GGCGGCGCCG CCGCTGCAGT GTCAAGATTT CGTCAACTAC GCGATGAAGG CCCAGGCGCA ATACTATGCG CGCGGCTGCC CACGCATCCC GTCGATGCAC GCCAACCGCG AAGGGCATTT CCAGTGGTGC CTGAAGCGCA ACGAAGGCCA GGTCGCCGCC GAACAGCGTG CCAAGGCGGC CACGCTGAAT TCGTGCCTGG CAGGAGCCGC GTCCCCGCCG CGCCCGCAAT CCGCCCAGAT GCAATCCACC GCGACCCGCG AGCCGGTGTG CTCGAGCTAC GGCCAGGCCG GCGAGAAGTG GCGCAACCGC GCAACCGCAC AGGGCTGCAA CGTCGCGGCG ATCCCGGTGC CGCGCGGCTG GGCCAGCTAC GCCTGGGGCG CCAATCAACT GTTCAGCTAC TGCATGGGCA CAAGCGACGC TGGCTTCCGT GGCCGCAGCG CGCAGGCGCT CGGCCACAAG GTGCAGCTCG AGAAGGCCTG CTCGCAGCAG CTGCGCCGAC CGGTCCGGCT GTAA
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Protein sequence | MMIETPSTTK AMLMSLGLAT LAATPASAAP PLQCQDFVNY AMKAQAQYYA RGCPRIPSMH ANREGHFQWC LKRNEGQVAA EQRAKAATLN SCLAGAASPP RPQSAQMQST ATREPVCSSY GQAGEKWRNR ATAQGCNVAA IPVPRGWASY AWGANQLFSY CMGTSDAGFR GRSAQALGHK VQLEKACSQQ LRRPVRL
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