| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0035 |
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| Symbol | |
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| ID | 3909718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 34035 |
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| End bp | 36800 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881916 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_483658 |
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| Protein GI | 86747162 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.233169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGT CGGTGCGTCT GACGTTGGCG ATGACGGCAC TTGTGCTCTG TGCGGTGGCG
GCGGTCGGCG TTCTGGCCTA CTACAATATC GGTCGCGCCG TGGTGCCGGC CGAACTCACG
CGTCTCGCCG GTCAGGCTAA GGCGCGGCTG GGCGCGTTCG ATTCGATCCT CCGGGTGCTG
CACAACGAGA TTCTCGCCGC GCGGACGCTG CCGGGGCATC AGGGTATCGT TCGGGCCGTC
CTCAATGGCG GCGTCGATCC GCAGGATCAC TTCACTTCGG CGAAGTGGCT CAGCCATCTC
GGCGACGTCT ATGCCGGCCA GATGAGCGTC AAGCCGAGTA TCGTCCGGTT CAGCCTGATC
GGCGTCGCCG ATGGCGGACG CGAATTGCTC AGCGTCGACC GCGCCGGACC GGACGGCGAC
ATTCGCGTCG TGCCGGCCGA CGAACTCGAG CGCGTCGGCG ATGATGAACT GTTCGAGCGG
ACGCTGGCGC TGCCGCCCGA GCAGGATGTC TACGCTTCGC CGATCCGCGC CGGCCCGGGC
CGCCACGGTG ACACCGCGCC GGTGCCGATG ATCTCGATTT CGGCGTTGCT GCGGGCGCCG
TCGGGCGCGC CGTTCGGCGT GCTCGTGCTC GACTTCGACT TGCGGCCGAC CTTCGAGCGG
ATCCGCGCCG CGCTCGACGA CACCACCAAG GTGTATTTCG TCGGTGCCGA TGGGCGCTAT
CTGCTGGATC TGCTCGACGG CCGGGTGACG CCGTCGGGCC AGACCGGCCG CTGGCAGGAC
GATTACCCCG ATCTGGCGAA GGCGCTGGCC GACAAGCAAG GCACCGCCAC GGTGCTCACC
GCGCCCGACG GCAAGCGGGT CGGAGCGGCG ATCGTGACCG CGCCGCTGGT CGGCGGCCTG
CGCGTCGGCG TGATCGAGAC CCAGGATTTC AGGAAGATCA TCGCGCCGGC AACGGCGCTG
GAGAACACCA GCATCACGGT CGCATTGGTT GCCGCTCTGG TGGCCGTGCT GCTGTCGGCG
CTGCTGTCGC GGTCGCTCGC CAGGCCCGTG GCGCAGATCA CCGCCGCGGT CGCCGGTTTC
ACCCGGAGCG GACGGCTCGC CTTGCCGACC GGGCTGAGCG GCGAACCCAA GATCCTGGCC
GCCGCTTTCG CCCAGATGGT CGAGGAGATC GACAAGGCGA CCGCGGCGCT GCGCGCCAAG
TCGGAAGTGC TCGACAAGAC CATCGCCAGC ATGGCCGACG CCGTGCTGGT GATCGACGCC
GAGGGGCGCC GGGTGTTCGC CAATCCGCCC GCCAACGCGA TCTTCGGTGA TTTCCGGGAC
ATCGGATCGG AGACGTGGAG ACGCGAGTAT CAGCGCTTCC GGGCCGACGG CGTGACACCG
ATGGCGGAGA CGGAATGCCC CGCGCGCCGC GCCTCCCAGG GCGAGGGGTT CGACAATGTC
GAGATCGGCA TCAGGCGCGA CGGCGGGCCG CTGCTGCAAC TTGCCGCCAG CGCGCGCACG
ATGCAGAAGG CCGATGGGAG TTTCGACGGC GCCGTGATCG TCTATCGCAA CGTCACCGCG
CTGAAGGAGA CCGAGCGGCA ACTGCGCCAG GCACAGAAGA TGCAGGCGAT CGGCCAGCTC
ACCGGCGGCG TCGCGCACGA TCTCAACAAC ATCCTCACGG TGCTGACCGG CGGGATCGAG
ATCCTCGCCG AAGGCGTCAG CGACCGCCCG GCGCTCAGGG ACGTGGCGCT GATGGTCGAT
CAGGCGGTGA CCCGCGCCAG CGACCTGACC AACGGGCTGC TGTCGTTCGC GCGCAAGCAG
CCGCTGCAGC CGCGCAGCAT CGACGTCAAC GCACTGATGC AGGAAACCGC GCGGCTGCTG
CGCTCGACGC TCGGCGGCGA CATCGAGGTC GAATTCGAGC CCGCGCCCGG CCTGCGCCCG
GCGCTGGCCG ACTCGTCGCA GCTCTCCAGC GCCCTGATCA ATCTGGCGAT CAACGCTCGC
GACGCGATGC CGCGCGGCGG CACATTGCGG CTCGCGGCCG GCAACGCCGA TCTCGACCAG
CGCTACGCCG ATCAGCACGA CGAAGTCGTC GCCGGGCGCT ACGTCGTGCT GGCGGTGACC
GACACCGGCA TCGGCATTCC GGCCGCGATC CGCGACCGGG TGTTCGAGCC GTTCTTCACG
ACGAAGGCGG TCGGCGAAGG CACCGGGCTC GGGCTCAGCA TGGTGTACGG CTTCGTCAAG
CAGTCCAATG GCCACATCGA GATCAGCAGC AACGAGGGCG CAGGCACCAC GGTCCGGCTG
TATCTGCCCT GCGCCGCGGC GCAGGACGAT GCCGCCGATG CCGACGCTCC GCGGCAGGCG
CAAGGCGGGC GCGAGACCAT TCTGGTGGTC GAGGACGATG TGCTGGTGCG CAGCTATGTG
ATGACCGATC TGGCCGGGCT CGGCTACACC GCCCATGGCG CCGCCACCGC CGCGGAGGCG
ATGGTGCTGG TGTACGACGA ACTCGAATTC GATCTGCTGT TCACCGACGT GATGCTGTCG
GGCGGCATCG ACGGCCGGCA GCTCGCCGAT GCGCTGCGCA AACACCGTCC CGGCCTCAAG
GTGCTGTTCA CCTCCGGCTA CAGCGGCGGC GCCTCGCGGC CGCAGGCCGA CCGCACGGAC
GGATCCCTGA TGCTGGCGAA GCCCTACCGC CGCGCCGAAC TGGCGCGGAT GCTGCGGCTC
GCGCTCGACG GCGAGGCCGC ATCCGCGCCG GCGAACGACG GCGACGTCCG CTTGCGCGGC
ACGTAG
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| Protein sequence | MRLSVRLTLA MTALVLCAVA AVGVLAYYNI GRAVVPAELT RLAGQAKARL GAFDSILRVL
HNEILAARTL PGHQGIVRAV LNGGVDPQDH FTSAKWLSHL GDVYAGQMSV KPSIVRFSLI
GVADGGRELL SVDRAGPDGD IRVVPADELE RVGDDELFER TLALPPEQDV YASPIRAGPG
RHGDTAPVPM ISISALLRAP SGAPFGVLVL DFDLRPTFER IRAALDDTTK VYFVGADGRY
LLDLLDGRVT PSGQTGRWQD DYPDLAKALA DKQGTATVLT APDGKRVGAA IVTAPLVGGL
RVGVIETQDF RKIIAPATAL ENTSITVALV AALVAVLLSA LLSRSLARPV AQITAAVAGF
TRSGRLALPT GLSGEPKILA AAFAQMVEEI DKATAALRAK SEVLDKTIAS MADAVLVIDA
EGRRVFANPP ANAIFGDFRD IGSETWRREY QRFRADGVTP MAETECPARR ASQGEGFDNV
EIGIRRDGGP LLQLAASART MQKADGSFDG AVIVYRNVTA LKETERQLRQ AQKMQAIGQL
TGGVAHDLNN ILTVLTGGIE ILAEGVSDRP ALRDVALMVD QAVTRASDLT NGLLSFARKQ
PLQPRSIDVN ALMQETARLL RSTLGGDIEV EFEPAPGLRP ALADSSQLSS ALINLAINAR
DAMPRGGTLR LAAGNADLDQ RYADQHDEVV AGRYVVLAVT DTGIGIPAAI RDRVFEPFFT
TKAVGEGTGL GLSMVYGFVK QSNGHIEISS NEGAGTTVRL YLPCAAAQDD AADADAPRQA
QGGRETILVV EDDVLVRSYV MTDLAGLGYT AHGAATAAEA MVLVYDELEF DLLFTDVMLS
GGIDGRQLAD ALRKHRPGLK VLFTSGYSGG ASRPQADRTD GSLMLAKPYR RAELARMLRL
ALDGEAASAP ANDGDVRLRG T
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