Gene RPB_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0029 
Symbol 
ID3909712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp27426 
End bp27839 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content66% 
IMG OID637881910 
ProductNUDIX hydrolase 
Protein accessionYP_483652 
Protein GI86747156 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID[TIGR00586] mutator mutT protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.999066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGT CTATCAAGCT CCTCCTCGTC GTCGCCGTCG CGCTGATCGA CGCCGACAAC 
CGCGTGCTGA TCGCGCAGCG GCCGAAGCAC AAGCAGCTCG GCGGGTTGTG GGAATTTCCC
GGCGGCAAGG TCGATCCCGG CGAGCGGCCG GAAGCCGCGC TGATCCGCGA ACTCGATGAG
GAACTCGGCA TCACGGTGAA AGAAGCCTGC CTGGCGCCGC TGACCTTCGC CAGCCATGCC
TATGAGGACT TTCACCTGCT GATGCCGCTG TATGTCTGCC GGCGCTGGGA CGGGCAGGTG
ATGCCGCGCG AGGGCCAGGA GCTGGCCTGG GTCCGCGCCA ACAAGCTGCG CGACTACCCG
ATGCCGCCGG CCGATATCCC GCTGATCCCG CCGCTGATCG AGCTGCTGAT GTAG
 
Protein sequence
MTKSIKLLLV VAVALIDADN RVLIAQRPKH KQLGGLWEFP GGKVDPGERP EAALIRELDE 
ELGITVKEAC LAPLTFASHA YEDFHLLMPL YVCRRWDGQV MPREGQELAW VRANKLRDYP
MPPADIPLIP PLIELLM