Gene RPB_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPB_0023 
Symbol 
ID3909706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris HaA2 
KingdomBacteria 
Replicon accessionNC_007778 
Strand
Start bp23383 
End bp23877 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content67% 
IMG OID637881904 
Producthypothetical protein 
Protein accessionYP_483646 
Protein GI86747150 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT ACACGCTGCG GTGCGATCGT GGCCACTCGT TCGAGAGCTG GTTCCAGAGC 
TCGTCGGCTT ACGATTCGCA GGTGCGGCGC AAGCTGGTGG AGTGCCCTTC CTGCGGTTCG
GTGAAGGTCG AGAAGGCGAT CATGGCGCCG CAGATCGTCG GCAAGAAAGG CCGCGGCCGC
GCGCCGGAGC CGGTGACGAG CGAACCCGCC GTGGGCGAGG CGTCGGAGCC GATGACTTCG
GAGCCGTCGG CGACGCCGCT GATGCTGGCG CAGGAGCGCG AGCTGCGCGC CAAGCTGAAG
GAATTGCGCG ACCACATCGT CAAGACCGCC GACAATGTCG GCGAGCGCTT CCCCAACGAA
GCCCGCAAGA TGCATTACGG CGATATCGAG CACCGCCCGA TCTTCGGCGA AGCCTCGCCC
GCGGAGGCCA AGGCGCTGAT CGAGGAAGGC ATCGAGGTCG CGCCGCTGCC GGTGCTGCCG
GAAGACCGCA ATTAG
 
Protein sequence
MIRYTLRCDR GHSFESWFQS SSAYDSQVRR KLVECPSCGS VKVEKAIMAP QIVGKKGRGR 
APEPVTSEPA VGEASEPMTS EPSATPLMLA QERELRAKLK ELRDHIVKTA DNVGERFPNE
ARKMHYGDIE HRPIFGEASP AEAKALIEEG IEVAPLPVLP EDRN