| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0017 |
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| Symbol | |
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| ID | 3910222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris HaA2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007778 |
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| Strand | - |
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| Start bp | 16792 |
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| End bp | 18438 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637881898 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_483640 |
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| Protein GI | 86747144 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAG CTCTCACATC CAAACGGATC ACCTTCGGCG AGGGTGGTCT GACGCTCGTG
TTCACGCTGA CCACGGCGCT TTGCATCTAC GCGTCGATCT TCGCCAAGGA CGCGCCGTTC
GCCTTCCACG CCGCTCTCGG CGCTGCCGTC AGCGCCTGGG CCGTGTTCGC GATCATCACC
CGCTACAGCC GCCGCACCGG CGTGCCGCCG CAGGAAATCA ACGGCGTGCC GAACTACAAT
CTCGGCCCGA TCAAATTCCT GTCCTTCATG GCGATGTTCT GGGGCATCGC CGGGTTCTCG
GTCGGCCTCT ACATCGCGTT GGAGCTGGCC TATCCGGGGC TCAACGTCGC GCAATGGGTC
AATTTCGGCC GGCTGCGCCC GCTGCACACC TCCGCGGTGG TGTTCGCGTT CGGCGGCAAC
GTGCTGCTGG CGACCTCGTT CTACGTGGTG CAGCGGACGA CGCGGGCGCG GCTCGCGGGC
GATCTGGCGC CGTGGTTCGT GGCGATCGGC TACAACTTCT TCATCGTCAT CGCCGGCACC
GGCTATCTGC TCGGCGTGAC GCAATCCAAG GAATACGCCG AACCCGAATG GTACGCCGAC
CTGTGGCTGA CCATCGTCTG GGTGACCTAT CTGCTCGTGT TCGTCGCGAC ATTGATGAAG
CGCAAAGAGC CGCACATCTA CGTCGCGAAC TGGTTCTACC TCGCGTTCAT CCTGACCATC
GCCGTGCTGC ATCTCGGCAA CAATCCGACG CTGCCGGTGT CGCTGCTCGG CTCGAAGTCG
TACATCGCCT GGGCCGGCGT GCAGGACGCG ATGTTCCAGT GGTGGTACGG CCACAACGCG
GTCGGCTTCT TCCTCACCGC CGGCTTCCTC GCCATCATGT ACTACTTCAT CCCGAAGCGG
GCGGAACGGC CGGTGTATTC CTATCGGCTG TCGATCATCC ACTTCTGGGC GCTGATCTTC
CTCTACATCT GGGCCGGCCC GCACCATCTG CACTACACCG CGCTGCCGGA CTGGACGCAG
ACGCTCGGCA TGACCTTCTC GATCATGCTG TGGATGCCCT CCTGGGGCGG CATGATCAAC
GGCCTGATGA CGCTGTCGGG CGCCTGGGAC AAGCTGCGCA CCGACCCGGT GCTCCGCATG
ATGGTGGTGT CGGTCGCGTT CTACGGCATG TCGACCTTCG AAGGCCCGAT GATGGCGATC
AAGGCCGTCA ACTCGCTCAG CCACTACACC GACTGGACCG TCGGCCACGT CCACTCCGGC
GCGCTCGGCT GGGTCGGCTT CGTCTCGTTC GGCGCGCTGT ACTGCCTGGT GCCGTGGATC
TGGGGCCGCA AGGAGCTCTA CAGCCTCCGG CTGGTGAACT GGCACTTCTG GATCGCGACG
CTCGGCATCG TGCTCTACAT CTCGGCGATG TGGGTGTCGG GGATCCTGCA GGGCCTGATG
TGGCGCGCCT ACACCTCGCT CGGCTTCCTC GAATATTCGT TCATCGAGTC CGTCGAGGCG
ATGCATCCCT TCTATGCCAT CCGCGCCGCG GGCGGCGGAC TGTTCCTAAT CGGCGCGCTG
ATCATGGCCT ACAACCTCTG GATGACGGTT CGCGTCGGCG AATCGTCGGA GGCCCAGCCC
CGCGTCGCCC TGCAGGCCGC CGAGTAA
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| Protein sequence | MNQALTSKRI TFGEGGLTLV FTLTTALCIY ASIFAKDAPF AFHAALGAAV SAWAVFAIIT
RYSRRTGVPP QEINGVPNYN LGPIKFLSFM AMFWGIAGFS VGLYIALELA YPGLNVAQWV
NFGRLRPLHT SAVVFAFGGN VLLATSFYVV QRTTRARLAG DLAPWFVAIG YNFFIVIAGT
GYLLGVTQSK EYAEPEWYAD LWLTIVWVTY LLVFVATLMK RKEPHIYVAN WFYLAFILTI
AVLHLGNNPT LPVSLLGSKS YIAWAGVQDA MFQWWYGHNA VGFFLTAGFL AIMYYFIPKR
AERPVYSYRL SIIHFWALIF LYIWAGPHHL HYTALPDWTQ TLGMTFSIML WMPSWGGMIN
GLMTLSGAWD KLRTDPVLRM MVVSVAFYGM STFEGPMMAI KAVNSLSHYT DWTVGHVHSG
ALGWVGFVSF GALYCLVPWI WGRKELYSLR LVNWHFWIAT LGIVLYISAM WVSGILQGLM
WRAYTSLGFL EYSFIESVEA MHPFYAIRAA GGGLFLIGAL IMAYNLWMTV RVGESSEAQP
RVALQAAE
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