| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPB_0014 |
|---|
| Symbol | |
|---|
| ID | 3910219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris HaA2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007778 |
|---|
| Strand | - |
|---|
| Start bp | 14983 |
|---|
| End bp | 15864 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637881895 |
|---|
| Product | cytochrome c oxidase, cbb3-type, subunit III |
|---|
| Protein accession | YP_483637 |
|---|
| Protein GI | 86747141 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACC ACGCACATCA CGCCGAGATC GACAAGGTCA CCGGCACCAG CACCACCGGC
CATGAATGGG ACGGCATCAA GGAACTGAAC ACGCCGCTGC CGCGGTGGTG GATCTGGACC
TTCTATGCCT GCATCGTCTG GTCGCTCGGC TACTTCCTGG TCTATCCGGC TTGGCCGTTG
GTCAACGGCT ACACCACCGG CTTCTTCAAC TACTCCTCGC GCGCCGAACT GGCGGTCGAC
CTCGCCAAGC TCGACGTGGT GCGCGGCGAC AAGATGGCGG CGCTCGCCAC GGCGCCACTC
GCCGACATCG AGAAGGATCC GGCGCTGCTG GCTTTGGCCC GCGCCAAGGG CAAGGTGGTG
TTCGGCGACA ATTGCGCCGC CTGCCACGGC TCCGGCGGCG CCGGCGCCAA GGGCTACCCC
AACCTGAACG ACGACGACTG GCTGTGGGGC GGCACGCTCG AGCAGATCGA GAAGACCCTC
CTGTACGGCG CCCGCTCGGG CCACGACGAC GCCCATCAGG GCAACATGCC GGCGTTCGGC
AAGGACGGCC TGCTGGAGAA GGACCAGATC GTCCAGCTCG CCAATTACGT GCGCTCGCTG
TCGGGGTTGT CGGTCCGGCC CGGCACCGAT CTCGCCGCCG CCAAGCAGCT GTTCGCCGAC
AATTGCTCGT CCTGTCACGG CGACGAAGCC AAGGGCAATG TCGAGCTCGG CGCGCCGAAT
CTGACCGACC GGATCTGGCT CTACGGCTCG GATGAGGCTA CGTTGATTGA GACCATGACC
AACGGCCGCG GTGGCGTGAT GCCGGCCTGG AACGAGCGTC TCGATCCGGC CACCATCAAG
GCGATGGCGG TGTACGTGCA CTCGCTCGGC GGCGGCAAAT AG
|
|---|
| Protein sequence | MADHAHHAEI DKVTGTSTTG HEWDGIKELN TPLPRWWIWT FYACIVWSLG YFLVYPAWPL
VNGYTTGFFN YSSRAELAVD LAKLDVVRGD KMAALATAPL ADIEKDPALL ALARAKGKVV
FGDNCAACHG SGGAGAKGYP NLNDDDWLWG GTLEQIEKTL LYGARSGHDD AHQGNMPAFG
KDGLLEKDQI VQLANYVRSL SGLSVRPGTD LAAAKQLFAD NCSSCHGDEA KGNVELGAPN
LTDRIWLYGS DEATLIETMT NGRGGVMPAW NERLDPATIK AMAVYVHSLG GGK
|
|---|
| |