Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPB_0004 |
Symbol | recF |
ID | 3910209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris HaA2 |
Kingdom | Bacteria |
Replicon accession | NC_007778 |
Strand | + |
Start bp | 4098 |
End bp | 5234 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637881885 |
Product | recombination protein F |
Protein accession | YP_483627 |
Protein GI | 86747131 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.949729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCT CCCGCATCAC CCGGCTGACG TTGACGCATT TCCGCAATTA TCGGGCGGCG GTGCTGACGA CGAGTGCCGA GCGCGTGGTG CTGGTCGGCG CCAACGGCGC CGGCAAGACC AATTGCCTCG AGGCGATCTC GTTTCTGTCG CCGGGGCGGG GGTTGCGGCG GGCGACGCTG GACGACGTCG CCGACAATGA GGGCGACGGC TCCTGGGCGG TGGCGGCGGA GGTCGAGGGC GCGCTCGGGC TGGCGACGCT CGGCACCGGG ATCGATCCGC CGCGCGCCGA CGCCGCGACC TCGCGGCGCT GCCGGATCGA CCGCGAGCCG GTCGGCTCCG CCACCGCATT CGGCGATCAC TTACGCATGG TGTGGCTGAC GCCGGCGATG GACGGGCTGT TCATGGGCGC GGCCTCGGAA CGGCGGCGGT TCTTCGACCG GCTGGTGCTG GCGATCGACA GCCAGCATTC GGGCCGGGTC TCGGCGCTGG ACCGCAGCCT CAGATCGCGG AACCGCCTGC TGGAGGTACG TTACCCCGAC GCGCATTGGC TCGATGCGAT CGAGCGCGAA ACCGCCGAGC TCGCGGTCGC GGTCGCGGCG ATGCGCGGCC AGACCGCGAT GCGCCTCGCC GCGATGCTCG ACGCCCGCGG CGCGGCATCG GCGTTTCCGT CGGCGAAGAT CATGCTCGAC GGCTGGATGG AGAGCGCGCT GCTCACCGAA CCCGCCACGG CGGTGGAAGA TCGCTACCGC ACCATCCTGC GCGAGGGCCG CCCGCGCGAC GCCGCCGCCG GCCGCACCCT CGACGGCCCG CATCTGACCG ACCTCGAAGT CGTCTACGCG CCGAAGGCGA TGCCGGCGCG CGACGCCTCC ACCGGCGAAC AGAAGGCGCT GCTGATCGGG CTCGTCCTCG CGCATGCGCA GCTCGTCTCG GAGATGACCG GCATCACGCC GCTGCTGCTG CTCGACGAGG TGGTGGCGCA TCTCGACCCG TCGCGGCGCG CCGCGCTGTT CGAGGAATTG GCGAAGCTCG GCGCCCAGGT CTGGATGACC GGCGCCGACC CCGCAGCGTT CGCCGAGATC GGTTCCGGCG CCGAGATATT CACCGTCGAA TCCGGCCGGA TCAGGCCGCA ACAATGA
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Protein sequence | MTASRITRLT LTHFRNYRAA VLTTSAERVV LVGANGAGKT NCLEAISFLS PGRGLRRATL DDVADNEGDG SWAVAAEVEG ALGLATLGTG IDPPRADAAT SRRCRIDREP VGSATAFGDH LRMVWLTPAM DGLFMGAASE RRRFFDRLVL AIDSQHSGRV SALDRSLRSR NRLLEVRYPD AHWLDAIERE TAELAVAVAA MRGQTAMRLA AMLDARGAAS AFPSAKIMLD GWMESALLTE PATAVEDRYR TILREGRPRD AAAGRTLDGP HLTDLEVVYA PKAMPARDAS TGEQKALLIG LVLAHAQLVS EMTGITPLLL LDEVVAHLDP SRRAALFEEL AKLGAQVWMT GADPAAFAEI GSGAEIFTVE SGRIRPQQ
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