| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4545 |
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| Symbol | |
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| ID | 3907522 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5430312 |
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| End bp | 5431700 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881878 |
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| Product | 60 kDa inner membrane insertion protein |
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| Protein accession | YP_483620 |
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| Protein GI | 86743220 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.374078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTGGATC CCCTATACCA CCTCGCGGCG AACGCGATCG TCTTCTTTCA CCGGGGATTT
GCGCCGATCT TTGGTGCTGA CAGTTTCTTC TCCTGGGCCT TTTCGGTCGT CCTGCTGGTC
GTCTGCGTCC GTATTCTGAT CTTCCCGCTG TTCGTCAAGC AGGTGAAGTC GCAGCGGACG
ATGCAGATGA TGCAGCCCCG GATCAAGGAG ATCCGGGAGA AGCATGGGCA CGACAAACCC
CGCATGCAGC AGGAGATGAT GGCGCTGCAG CGGGAGCACG GAAACCCGCT CCTCGGCTGC
CTCCCGATCT TCCTCCAGAT CCCGCTGTTC ATCTCGCTGT TCCACGTGTT CACCCACCTG
GCGCCGATGA ACGAGGGTCC GAACCACTCG CTGGTCTGGC GTCCCCGGGT CGGGCTCTCC
GCAGACCAGG TGGAGCAGAT CGCCTCGGCC AAGGTGTTCG GCATCTCGCT GGCGAGCAAG
TTCACCTCCG ATGGCGATTT CTCGCACTTC CTCGGCGTCG ACAGCACGCA CGTCAGGATT
CTCGCGATCG TCCTGATCGT GCTGATGGGT CTTACGACCT TCCTCACGCA GCGCCAGATC
ATGGCCCGCA CCGGGCCGCT CGACCCGCAG CAGGCGATGG TGCAGAAGGC GCTGCTCTAT
GGCTCCCCGC TGATGCTCGC CTTCTTTGGT TTCCGTTTCC CGATCGCTGT GCTGCTGTAC
TGGCTCACCA CCAACCTGTG GAGCATGGGC CAGCAGTTCT TCATCATGAA GAAGATGCCG
CCGATCAAGC CCGCGGATGC GAACGGCCGG CTGCCCGGTG CCCGTCCGGC CGCCGGCGGT
GCCGTCACCC CCGCTCGGCC GGCTCCCGGT GTCCGAGCCG GGGCGAAGTC GAAGAACCGC
CCCCGGTCCG CCTCGGTGAC CCCGACCAAG GGCGGCGATT CCGGTGCCGC GGCGGCCGGT
CGGACGTCCT CGACGGCTCC CCCCGGCACC CGGTCCCGTA ACGGCACCTC GACCGCGAGC
CGTACCACGA CGACCCCGAA AGCGGCGACG ACCCCGAAGA GCGGTAAGGC GGGGGCGCCG
GGCGGTCCCG GGGCCAACGG CGTCTCGGGC GGTGGCGTCT CGGACAACGG CGTCTCGGAC
AACGGCGTCG CCGCTACCAC GGCCGCATCC ACGGGGCGCA GCGCGGAGGC GAAGACCAGC
GCGGCGGGCC GCAGGAACGC CCCGGGCAAG AATGCCGGGC AGAGCGCGGC GAGCGGGCCG
ACGGCGCCCT CCGACGGGGA GAGCACGCCC CGGCCGGCAC CCGTACCCGC CGGAGTGCGG
CGCCAGGTCG GCGGCTCCCG ACCCGCGAAA CGGCGCGGCA AGAGCAAGCG GCCCGGTGGG
CGGCGTTGA
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| Protein sequence | MLDPLYHLAA NAIVFFHRGF APIFGADSFF SWAFSVVLLV VCVRILIFPL FVKQVKSQRT
MQMMQPRIKE IREKHGHDKP RMQQEMMALQ REHGNPLLGC LPIFLQIPLF ISLFHVFTHL
APMNEGPNHS LVWRPRVGLS ADQVEQIASA KVFGISLASK FTSDGDFSHF LGVDSTHVRI
LAIVLIVLMG LTTFLTQRQI MARTGPLDPQ QAMVQKALLY GSPLMLAFFG FRFPIAVLLY
WLTTNLWSMG QQFFIMKKMP PIKPADANGR LPGARPAAGG AVTPARPAPG VRAGAKSKNR
PRSASVTPTK GGDSGAAAAG RTSSTAPPGT RSRNGTSTAS RTTTTPKAAT TPKSGKAGAP
GGPGANGVSG GGVSDNGVSD NGVAATTAAS TGRSAEAKTS AAGRRNAPGK NAGQSAASGP
TAPSDGESTP RPAPVPAGVR RQVGGSRPAK RRGKSKRPGG RR
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