Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4544 |
Symbol | |
ID | 3907521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5429640 |
End bp | 5430194 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881877 |
Product | single-stranded nucleic acid binding R3H |
Protein accession | YP_483619 |
Protein GI | 86743219 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.837562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGGTT CGGCACCTGA ACTGGCTGTG GATGGAGCCG GAGCCTCCGA CGAGCACGCT TCCTCGGACG AGACCGCCGG CACGGAGGAT CGGCGTCTGT CCGATCTCGA GTTGGAAGGC GAGATCGCCG CCGACTACAT CGAGGGTCTG CTCGACATCG TCGACATGGA CGGTGACCTC GACCTCGACG TCGAGAGCGG CCGCGCCGTC GTCGCCGTGG TGGGCGAGGG GCTGGACAAG CTCATCGGGG CGGGCGGCGA GACGCTGGAG GCGTTGCAGG AACTGACCAG GCTCGCGGTG CTCCAGAAGA CGGGCACCCG CAGCCGTCTC ATGCTCGACG TCGGCGGCCA TCGCGCCCGG CGGCGGGTCG AGCTACGCAA GATCGCGATC GCCGCGGCGT CGCGTGCCAT CACGCGCGGT GAGCCGGAGA AGCTGGCTCC CATGACGCCG TTCGAGCGCA AGGTGGTGCA CGACACCGTC GCCGGGATCG ACGGCGTGCA CAGCGAGTCC GAGGGCGAGG AACCCGGCCG CCGGGTAGTC ATCCTTCTCG GCTGA
|
Protein sequence | MTGSAPELAV DGAGASDEHA SSDETAGTED RRLSDLELEG EIAADYIEGL LDIVDMDGDL DLDVESGRAV VAVVGEGLDK LIGAGGETLE ALQELTRLAV LQKTGTRSRL MLDVGGHRAR RRVELRKIAI AAASRAITRG EPEKLAPMTP FERKVVHDTV AGIDGVHSES EGEEPGRRVV ILLG
|
| |