Gene Francci3_4544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4544 
Symbol 
ID3907521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5429640 
End bp5430194 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content69% 
IMG OID637881877 
Productsingle-stranded nucleic acid binding R3H 
Protein accessionYP_483619 
Protein GI86743219 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.837562 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGTT CGGCACCTGA ACTGGCTGTG GATGGAGCCG GAGCCTCCGA CGAGCACGCT 
TCCTCGGACG AGACCGCCGG CACGGAGGAT CGGCGTCTGT CCGATCTCGA GTTGGAAGGC
GAGATCGCCG CCGACTACAT CGAGGGTCTG CTCGACATCG TCGACATGGA CGGTGACCTC
GACCTCGACG TCGAGAGCGG CCGCGCCGTC GTCGCCGTGG TGGGCGAGGG GCTGGACAAG
CTCATCGGGG CGGGCGGCGA GACGCTGGAG GCGTTGCAGG AACTGACCAG GCTCGCGGTG
CTCCAGAAGA CGGGCACCCG CAGCCGTCTC ATGCTCGACG TCGGCGGCCA TCGCGCCCGG
CGGCGGGTCG AGCTACGCAA GATCGCGATC GCCGCGGCGT CGCGTGCCAT CACGCGCGGT
GAGCCGGAGA AGCTGGCTCC CATGACGCCG TTCGAGCGCA AGGTGGTGCA CGACACCGTC
GCCGGGATCG ACGGCGTGCA CAGCGAGTCC GAGGGCGAGG AACCCGGCCG CCGGGTAGTC
ATCCTTCTCG GCTGA
 
Protein sequence
MTGSAPELAV DGAGASDEHA SSDETAGTED RRLSDLELEG EIAADYIEGL LDIVDMDGDL 
DLDVESGRAV VAVVGEGLDK LIGAGGETLE ALQELTRLAV LQKTGTRSRL MLDVGGHRAR
RRVELRKIAI AAASRAITRG EPEKLAPMTP FERKVVHDTV AGIDGVHSES EGEEPGRRVV
ILLG