Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4543 |
Symbol | |
ID | 3907520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5427752 |
End bp | 5429626 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881876 |
Product | hypothetical protein |
Protein accession | YP_483618 |
Protein GI | 86743218 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTC GGCGCCGGCC GACGCGTTCC CTCGTGCTGG CCGCCGCCGT GGGTGTCGGC TTGGCGGCCG TGCTCGGCGT TCTGCATGCC TATCTGACCA GACCCTTCTG GTACGACGAG ATCTGGCGCG CCCACTTCGT CAGCGAACCG GCGTCCTCGT TCTGGCCGGA GCTGACCGTC GCCAACACCC CCTCGGCGCT GGGTTGGTTC GGCCTGACCC GGGTGGCCGG CGAGCTCCTC GGCTGGCACA GCTGGTCGCT CCGGCTTCCC GGGTATCTTG CCGTGCCCTT GCTCGGCGCC GCGATCGTCC TGCTCACCCG CCGTTTCACC GGCCTGGTCG CGGCGGTGTT CGCCACGTGC TGGCTGTGCC TGAACGTGAC CTTCTTGGAT CTCGCGACCC AACTCAAGCC GTATTCCGTC GAGGCGCTGG CCGCTGTCTG CATCGTCCTC GCCTGGTCGA CCGGATCATC TCCGCGGCCC TCGCTGTCCC CGTGGCCTGC ACCTGTCACC GGCGGGTTCT CCCGTGCCCG GCTCCTGCGA CGCACCGCGG CGGGCCTGTT GGCCCTGACC GCCGTGCCCG GGATCTTTCT GGTGCTGCCG TTGGCGACCG CGGAGGTATG GCGCGGTCCG GCGCGGCGCT GGCGACTGGT GGAATGCCTG CCCGCGGTCG CCATCAGCGT GGCACACACC GTGTTCTTCA TCGGGCACCA GTCCAGTCAG CGTCGCGGCG ACTACTGGGA TCGCCAGTTC ATTGCCGGTC GTGGGCCGGT CGAGGCCGTA CGCTTCATCG TCGATCAGAT GCGAGCCTTC ATTACCGGTA TGCCGCCCGG CATCGACCGG TTCGACCCGA GCCTCATCCA TGCGACGGTG CCCGGGGGAC CGGTTGTCTC GGTGCTGCTC GCCGTGGCGG TGTCGATCGC CGGCCTGACC GGCGTCCTCG TGCTGGCGCG ACGACCGGAC GGCAGGCTGC TCCTCACCGC GCTCGGCGGA GCCCAGGTGC TGATGCTGGG AGCGAGCGCC GCGCGGTACT GGCCGTTCGG GCCGACCCGG ACCAACCTCT TCGTCGTGCC ACTGATCGTC GTTGTGATCG TGGTGGGCAC CCGGCGGCTG GTGGCCCTGT TCGTGGCGGC GGTGCGACCT CGTATCCCCG CCGCCGGGCC TCAGCCGGCC GTACCGGCAC CGATGGCCGC GACCCCGACC CTCCCTACCG GAGGAACCGT AACCAAGCGG TCACGATTGG ATGTTTCCGG TGTCTCGCCG ACGTCGAGCG CCAGCGCGAA CACGATTTCT CCGACCGCCG TGCTGCCGTT GGCCGGCCTC GCAATGATCA TCTTGCTTGG TGTCCCGCTC CTGGGAACCT CGCTGTCGGG AAGCGGGCAG CTCTGGGATC ATCGGCACCG GACTCGTGGC CTCGATCGGA TGGTCGACGC GGCCATCGCG GCCCGGCAGC TGCACCGCCC GGGAGACCTG GTGGTGGTCG GGGGTCGCCT CGCCCGGCCT GGCTGGCTGT ACGCGATGGA GGCGAGTGAC GACCCGGCGC GTGAGCCGGC AGCTCTCCCC AGCGCCGGCG CCGGGCGGGT ACCGGCCCGG GTACCACGGC AGGACACGAT CTTCTTCGGC GCTGCGGGTA CCTCCCTGGT CGGCGAGCTG GCGAACCGCC GGGTCCCGCC GACCCGGCTG CTCGTCTTCC TCTTCGACGC GGAGCGGCCG GCGCTCGCGC CCGACCTGGC CGCGCTGCCC CGGGCGGGGT GGTGCGCCGG CCGTGGCTGG CAGTTCCCCC TCACCGGAAC GCTGACCGTC TTCGATCGCT GCGCCGGCGC CGCCCCGCGA CTCGATCGGC CGCGGCGGAC CGTGGTGTCC TACCGGACGA CCTGA
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Protein sequence | MAGRRRPTRS LVLAAAVGVG LAAVLGVLHA YLTRPFWYDE IWRAHFVSEP ASSFWPELTV ANTPSALGWF GLTRVAGELL GWHSWSLRLP GYLAVPLLGA AIVLLTRRFT GLVAAVFATC WLCLNVTFLD LATQLKPYSV EALAAVCIVL AWSTGSSPRP SLSPWPAPVT GGFSRARLLR RTAAGLLALT AVPGIFLVLP LATAEVWRGP ARRWRLVECL PAVAISVAHT VFFIGHQSSQ RRGDYWDRQF IAGRGPVEAV RFIVDQMRAF ITGMPPGIDR FDPSLIHATV PGGPVVSVLL AVAVSIAGLT GVLVLARRPD GRLLLTALGG AQVLMLGASA ARYWPFGPTR TNLFVVPLIV VVIVVGTRRL VALFVAAVRP RIPAAGPQPA VPAPMAATPT LPTGGTVTKR SRLDVSGVSP TSSASANTIS PTAVLPLAGL AMIILLGVPL LGTSLSGSGQ LWDHRHRTRG LDRMVDAAIA ARQLHRPGDL VVVGGRLARP GWLYAMEASD DPAREPAALP SAGAGRVPAR VPRQDTIFFG AAGTSLVGEL ANRRVPPTRL LVFLFDAERP ALAPDLAALP RAGWCAGRGW QFPLTGTLTV FDRCAGAAPR LDRPRRTVVS YRTT
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