| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4538 |
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| Symbol | |
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| ID | 3907515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5422292 |
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| End bp | 5423608 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881871 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_483613 |
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| Protein GI | 86743213 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCAGGC GAGCTGAAAG GTATGCATCG GTGAAGCTGC TGCGTCTGGG AGACCAAGGT
TCCGCCGTTG CCGAGGTTCG GGCGGCCCTG ACCTATCTTG GTTTTCTTCC CGTGACGCCC
CGGCAGAGCC GGGATCCGGC CGGCCCAGGT AAGGGTGACC CAGGTAAGAG CGCTCCGGAT
AAGAGCGCCC CGGATAGAGG TGTTACCTCC GCCGCGGAAC CGTCCCAGGG CACGCGGGTC
CCGGCTGTCG ACGGTACTCT CGGCGGTGTT CCGGCCGAGC CGGCCGAGCC GGCCGATCGG
TTCGACCGAG ATCTCGACAA CGCGCTGCGC GCCTTTCAGC AGAGCCGGGG GCTGTCCGCC
GACGGGATAC TCGGTCCGGA CACGGCGCGT GCCTTGGAGG AGGCACGCCA CAAGCTCGGC
GACCGTCTGC TCTACCACAG CCCCGCGTAC CCTTTTGTCG GCGATGACGT GGCGGCGCTC
CAGGAACGCC TGTTCAACAT GGGTTTCGAC GTCGGCCGCA CGGATGGGAT CTTCGGGCCA
CGCACCGAGT CCGCGGTCCG CGACTTCCAG CGCAACCGGG GTCTCGATCC GGACGGCCAA
TGCGGGCCAC ACACCCTGCG CGAGCTCAAA CGCCTGCAGC GCACGGTCAC TGGTGGCCGG
CCCGACATGC TGCGGGAGTC CGTCCGGCTG TTGGCCCACG GCTCCTCGCT GCTCGGAGTC
GTCGTCGCCA TCGATCCCGG CCACGGTGGC GACGATCCGG GCATCGTCCG CGGCAACCTG
TGCGAACGGG ATCTCATGGC CGACCTCGCC GCTCGGATGT CCACGCGGCT ACTCGACTCG
GGCCTGCGGG CGCACCTCAT CCACGGCCTG GACGAGTCCC CCAGCGAGGA GGAGCGGGCC
GCGCGGGCGA ACGAGCTCGA AGCGGATCTC CTGATCTCGC TGCACGCCGA CAGCAGTCCA
TCCCCGCGCG CCCAGGGGGT GTCGGCCTAC TACTACGGCA ACGCGCGCGG GTCGTCCGCC
GTGGGTGAGC GCTTCGCCCA GCTCGTCCAC CGTGAGATCG TCTCCCGGAC CGACATGCTG
GACTGCCGCA CCCATCCGAA GGTCTGGAGC CTGCTTCGGC GGACCCGGAT GCCGGCCGTA
CGGCTCGACC TCGGATATCT GACAAACGAA CATGACGCCA AGGCCCTTGG CTCCACCGCA
TTCCGGGCAA CCGTCGCCGA GGCGGTGCTC GCCGCAGCCC AACGACTCTT TCTCCCACCC
GAGCAGGACG CGCCGACGGG CCAGCTTCAC GTCCCCCGCC TCGCCAGCCG CACCTGA
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| Protein sequence | MGRRAERYAS VKLLRLGDQG SAVAEVRAAL TYLGFLPVTP RQSRDPAGPG KGDPGKSAPD
KSAPDRGVTS AAEPSQGTRV PAVDGTLGGV PAEPAEPADR FDRDLDNALR AFQQSRGLSA
DGILGPDTAR ALEEARHKLG DRLLYHSPAY PFVGDDVAAL QERLFNMGFD VGRTDGIFGP
RTESAVRDFQ RNRGLDPDGQ CGPHTLRELK RLQRTVTGGR PDMLRESVRL LAHGSSLLGV
VVAIDPGHGG DDPGIVRGNL CERDLMADLA ARMSTRLLDS GLRAHLIHGL DESPSEEERA
ARANELEADL LISLHADSSP SPRAQGVSAY YYGNARGSSA VGERFAQLVH REIVSRTDML
DCRTHPKVWS LLRRTRMPAV RLDLGYLTNE HDAKALGSTA FRATVAEAVL AAAQRLFLPP
EQDAPTGQLH VPRLASRT
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