Gene Francci3_4518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4518 
Symbol 
ID3907495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5392995 
End bp5394353 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content69% 
IMG OID637881851 
Productprimary replicative DNA helicase 
Protein accessionYP_483593 
Protein GI86743193 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.729039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGTCA CCGAGATCTC GCGTGGTTCC GGTGGGAGTG CAGAGTTCGA CCGGACTCCC 
CCGCACGACC TGCCCGCTGA GCAGAGTGTG CTCGGCGGCA TGCTGCTGTC GAAAGACGCC
ATCGCCGACG TCGTCGAGGT CCTGCGGACG GGTGACTTTT ACCGTCCCGC GCACGGCCTC
GTGTACGAGG TCATCGGCGA TCTCTACGGC CGGGGGGAGC CTGCGGACGT CATCAGCGTC
GCCGCCGAGC TCAGCCGCCG AGATCTGCTC GAACGGGTGG GCGGTCCGGC CTACATGCAC
ACCCTCATCT CGAGCGTGCC CACTGCGGCC AACGCCGGGT ACTACGCCCG TATCGTCGCG
GAGAAGGCGG TCCTGCGCCG CCTCGCGGAG GCCGGCACCC GCATCGTGCA GCTCGCCTAC
GGCGCGGCTC CGGACGTCAG CGACGTCGTC GACCGCGCCC AGGCGGCCGT GTACGAGGTG
ACCGAGCGCC GGACGAACGA GGACTACCTG CCGCTGGGGG AGCTGCTCAA CCCGGCGTTG
GAGGAGATCG AGTCCATCCA GGGGCACGAC GGTTCGCTGA CCGGGGTGCC CACCGGTTTC
GTCGACCTCG ACGAGCTGAC CAACGGCCTG CACGGCGGCC AGCTGTGGAT CGTCGCGGCC
AGGCCGGCCG TGGGCAAGTC GACCCTCGGC CTGGACTTCG CCCGGGCGGC GTCGATCAAG
AACGGGATGG CGTCGGTCAT CTTTTCGCTG GAGATGAGCC GCATGGAGAT CACCATGCGG
CTGTTGTCCG CCGAGGCGCG GGTGTCCCTG CAGAACATCC GCACGGGCCG GCTCACCGAC
GACGACTGGG GTCGCCTGGC CCGCCGGATA GGCGAGGTCG CGGAGGCCCC GCTGTTCATC
GACGACAGCC CGCACCTGAC GATGATGGAG GTCCGGGCGA AGGCCCGGCG GTTGAAGCAG
CGTAACGAGC TGCGTCTGGT GATCCTCGAC TACCTGCAGC TGATGTCGTC GCCCAAGAAG
GTGGAGAACC GTCAGCAGGA GGTCAGCGAG ATCTCGCGGT CGCTGAAGCT GCTCGCCAAG
GAGCTCGACG TTCCGGTGGT CGCCATCTCC CAGCTCAACC GCGCCTCCGA GCAGCGGGCC
GACAAGCGTC CCCAGGTCTC CGACCTGCGC GAGTCCGGAA GCCTGGAGCA GGACGCCGAC
GCGGTGATCC TGCTGTACCG GGAGGACACG GTCGAGAAGG AGTCGGCGCG CGCCGGCGAG
GCGGACCTCA TCATCGCCAA GCACCGCAAC GGGCCGACTG GCACCGTCAC CGTCGCCTTC
CAGGGTCATT ACTCACGGTT CGTCGACATG GCGAACTGA
 
Protein sequence
MSVTEISRGS GGSAEFDRTP PHDLPAEQSV LGGMLLSKDA IADVVEVLRT GDFYRPAHGL 
VYEVIGDLYG RGEPADVISV AAELSRRDLL ERVGGPAYMH TLISSVPTAA NAGYYARIVA
EKAVLRRLAE AGTRIVQLAY GAAPDVSDVV DRAQAAVYEV TERRTNEDYL PLGELLNPAL
EEIESIQGHD GSLTGVPTGF VDLDELTNGL HGGQLWIVAA RPAVGKSTLG LDFARAASIK
NGMASVIFSL EMSRMEITMR LLSAEARVSL QNIRTGRLTD DDWGRLARRI GEVAEAPLFI
DDSPHLTMME VRAKARRLKQ RNELRLVILD YLQLMSSPKK VENRQQEVSE ISRSLKLLAK
ELDVPVVAIS QLNRASEQRA DKRPQVSDLR ESGSLEQDAD AVILLYREDT VEKESARAGE
ADLIIAKHRN GPTGTVTVAF QGHYSRFVDM AN