| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4516 |
|---|
| Symbol | |
|---|
| ID | 3907493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 5391662 |
|---|
| End bp | 5392453 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637881849 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483591 |
|---|
| Protein GI | 86743191 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.282122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCGT TCCTCGGGTA CCTGTTTTTC GCGCCGCTTA CGGCGCTCTT CTTCGGTTTC
CTCATCTGGC TGGTGCCGGC GATCCTGCTC CGGAACACGG ATGTGGTGAG CCGGCTGAAC
CTGCGGCCCT TCGCGTTCTT CGTCACCGGC TACGTCTTCA GCGGGCTGAT GGCCCTCTAC
CTGCTGGTGC TGGACGCCGG CCACGACGTC GCGCCGGCGG CCGGCGCCGT CGCATCCCTG
GCCCTCCTCT GGGCTGTTCG GCGGCAGTGG CGCCGGCATC GGCCACTGGG CACGCGGCAG
GTGGCGAGCA GGCGACGTGG TGGCCCGGTC CAGCCGGTCC AGCAGGGTTA CCCTGGCCCG
CCGGTGCAGC CGGGTTACCC CGGCCCGCCG GTGCAGCCGG GTTATCCGCA TCAGCCCGGC
CACCCGTACC CCCCCATGCC GCAGGCCGGG CCGGTCGCGA GAGGTCCATC CGGGTATCCC
GAGACCGCCG GATATTCGCT TACGCAGCCG GATCAGCCCC GCCCGGGCGG GGGAGGAGAC
GGTCCGGGCG GGGGAGAAGA CGGTCCGGGC GGGGGAGAAG ACGACCCGGC AGGCGGGGCG
GGTGATCCCG GTCAGCCGGG GTATCAGTCT GGGCCCGCGG GTCATCGGGC GGCACCGGAC
GGCGGTCGCG GGGCCGGTCG GCGGATCGCC GGCTACCCCT GGGCCGTTCC GCCCAGCGGG
CCCAGACCGG GGGGCCTACC ACCCGGCGCG CCCCCGTCCC CGCCACCGGC CGAGGCGGAC
CCTGATTCCT GA
|
|---|
| Protein sequence | MAAFLGYLFF APLTALFFGF LIWLVPAILL RNTDVVSRLN LRPFAFFVTG YVFSGLMALY
LLVLDAGHDV APAAGAVASL ALLWAVRRQW RRHRPLGTRQ VASRRRGGPV QPVQQGYPGP
PVQPGYPGPP VQPGYPHQPG HPYPPMPQAG PVARGPSGYP ETAGYSLTQP DQPRPGGGGD
GPGGGEDGPG GGEDDPAGGA GDPGQPGYQS GPAGHRAAPD GGRGAGRRIA GYPWAVPPSG
PRPGGLPPGA PPSPPPAEAD PDS
|
|---|
| |