Gene Francci3_4513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4513 
Symbol 
ID3907490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5387692 
End bp5388429 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content71% 
IMG OID637881846 
Producthypothetical protein 
Protein accessionYP_483588 
Protein GI86743188 
COG category[R] General function prediction only 
COG ID[COG0121] Predicted glutamine amidotransferase 
TIGRFAM ID[TIGR03442] conserved hypothetical protein TIGR03442 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.610304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGCCGGC ACCTCGCCTG GATCGGAACG CCACGGACCC TGGCGGGGCT GACCTTGGAG 
CGTCCGTACA GCCTGCTGCG CCAGTCGTGG TCGCCGAGGC GGATGCGCCA CGGCACGGTG
AACGCCGACG GGTTCGGAGT CGGCTGGTAC GCCCCGGCGC TGCGGGCGGC GCCGGCCCGG
TTCCGCCGGG CCGTGCCGAT GTGGACGGAC GCCTCGTACG CCTCGATCGC CGGCGCGGTC
GCCTCCGGCT GCGTGCTGGC GGCCGTGCGT AGCGCCACCG TCGGCATGCC GATCGAAGAA
AGCGCGACGG CTCCCTTCAC CGACGGCCAC CGGCTGCTCA GCCACAACGG CCGGGTCGAC
CCGGTGGCCG TCCGGCGGAT GCTGCGCGAC CGGCCCGACG CTCCGGTCCC GGACTCGACG
TGCGACTCCG CGCTGCTCGC CGCGCTGGTG TGGGAGCACG CCGGGAAGCG TCCACTCGCC
GAGGCGGTCG CCGAGGTCGT GCTGTCGCTG GACGCGGCGG GTTCGGGCGA GCGGGCCCGG
CTGAACCTGC TGGTGGTGGA TGGAACCCAG ATCGTGGCGA CCGCCTGGCG GGACAGCCTG
TCATACCGGA GGGAGAAGGA TGGAGTCCTG GTCGCAAGCG AACCAGACGA TGACGAACCG
GGCTGGGTGG ACGTTCCGGA CCATCACCTC CTGGTAGCCG ACACACATCA AGTCACTCTT
CGTAACATGA TCTCCTAG
 
Protein sequence
MCRHLAWIGT PRTLAGLTLE RPYSLLRQSW SPRRMRHGTV NADGFGVGWY APALRAAPAR 
FRRAVPMWTD ASYASIAGAV ASGCVLAAVR SATVGMPIEE SATAPFTDGH RLLSHNGRVD
PVAVRRMLRD RPDAPVPDST CDSALLAALV WEHAGKRPLA EAVAEVVLSL DAAGSGERAR
LNLLVVDGTQ IVATAWRDSL SYRREKDGVL VASEPDDDEP GWVDVPDHHL LVADTHQVTL
RNMIS