| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4504 |
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| Symbol | |
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| ID | 3907480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5376036 |
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| End bp | 5378465 |
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| Gene Length | 2430 bp |
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| Protein Length | 809 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637881836 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_483579 |
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| Protein GI | 86743179 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTTTGG ATGGACCGGC AGCGCGCATC CCCGCCACCG CTGCGTCGAC CGCCGGCACG
TCGACCGCCG GCACGTCGAC CGCCCATCCT CCGACGACCG CCTCGTCGAC GCGAGACGCC
GACCCGCTGC CAGAACCGTC GGCCCTCGGT CAAGCCGTCC TGCTCGGGAT GGAGATCGAC
GGAGTCCAGC GACAGATCCA GCACCTGACC GACGTGCTGA AGCAGTTACG CCGCCACCGC
CAGCACTGGG AAGCCGGTGG CCGGGCCGAG CAGAGTGTGG TCCGAGTGCT GGTCGGTATG
GACGACGCAG GGTGGCACGT GCTGCCGGAC CGACGGTGGC CAGGCACCCG CCGGGCCAAC
ATCGACGTGA TCGTGGTGGG GCCTGGCGGA GTCTTCGTGG TAGACGTGAA GAACTGGCGA
GAGATCACCG TCGAACGCGG CCGGTTATGG CGTGGCGACG CCGACGCGGA CGACGACGTC
CGCAAACTTC TGGATCAGAC CGTAGCGGTG GAGGAGGTGC TGGTAGAGGC AGGTCTGCCA
CCGACCGAGG TGGTTCCGCT GCTGGTTCTG GCCAGGCGGA AAAACGTCCG GGCACAACTC
GACCGGGTGA CGGTGCTCGG CGAGCAGGAC CTGACCCGCG ACCTGGCGCG TCGTGGCGCA
CGCCTGGCAC CGGACCTCGT TGAACAACTA CTGGACCGTC TGGCACGCGG TTGCCCGCCG
ATGCCCCGCG CCGCCGCCGT CACCACCGTC ACGGTCGCCG AGGCGCCGAC CTCACGGTCT
GTCCGCCGTC CGGTCGCGCG CCGGGCAGGT CCCTCTTCGA ACGGTACGGC CGCGACCGAA
AGCCCAGCCG CTATCGAGCG GCCCACTCAG GCCTACTGTC CGGCTCCGGC CGGGCGTCCG
ACTTCTTCCG AGCCGCTGTC GCCGCCCGAG CAATCGGTTC CACCAGATCA GGATGCGCTG
CTGAGCCGCG AGGAGCTGTG GCAAGAACTT CTCGACGCCG CCGCCCGAGA GCCGATCGAG
ACGTGGATGA CCTGGCTGCA CCCGACGCAG GCCCGCCTGG CCGGCCGGCA GTGGTCGGGT
CCGGCCCGCG TCCGCGGCGC GGCCGGTACC GGCAAGACGG TTATCGCGTT GCACCGCGCC
AAGTATCTGG CCGCCCGCGG GGAACGGGTG TTGTTCACCT CGCTGGTGCG TACGCTGGGG
CCGGTCTACC GCGCACTGCT GACCCGGATG GCCCCCGAGC ACGTCGACCG GATCGAGTTC
GCCACCGTCC ACGCCGTCGC CACACGTTGT CTTCGCGAAC ACGGCTTGGC AGACCGGCAC
CAGCAGGAGG CCGCCGACAC CTGTTTCTGG CGCGCCTGGG GGCAGGTCGG GCAGTTCTCG
GTTCTGCCCG GGCTCGGCCT GGCTCCCGGG TATTGGAAGG ACGAGATCGC GACAGTCGTC
AAGGGCCGAG GCCTGACCGA CTTCGAGCAG TACGCCAAGC TGGCACGCGT CGGGCGCAGC
ACTCCCTTGC AACCGACCCA CCGGCGTGCG GTGTGGGAGC TGTACGAACG GTACGAGCAG
CTCCGGACAG AGCGCGGCGT CCTCGATCGC GACGACGTGC TGCTCCTGGC TCGCGACCTG
GTGCGCGAGA GTTCCGACAC CCGGTACGAC GCGGTGATCG TTGACGAGGT ACAGGACCTG
ACGTGCGTCG GTCTGCAACT GCTGCATGCC TTCGTCGGCG ACAAGCCGGA CGGCCTGCTC
GTGGTCGGCG ATGGCCAGCA GTCCATCTAT CCCGGCGGTT TCACCCTCGC CGAGGCCGGC
GTCGCCGTCG TCGGACGCTC CACCGTGCTC GGGAGAAACT ACCGTAATCG CGAGAAGATC
CTGCGCTACG CTCAGGCGGT AGTCGCCGAC GACAGCTTCG ACGACCTCGA CGGCGTCCAG
GAACGCGGGC GGCGCGAGGT CGACGTCGAC CGGCCGGGAG GCGAGATCCG CGAGGTCACG
GTGTCGGGCA CCGTGGCGCA GGATGCGGCG CTCTGCGAGC ACCTCGTGGA GTTCCATGAC
AATCGGAACG TCCGTTACGG CGATATGGCG GTGCTCGTGC CGACGAACGC CGCGGCTGCG
CGGTGGCTGC GCGTCCTCAC CGAGCGGGGC ATTCCAGCGG TTTCCCTCAA GGAGTATGAC
GGAACCAGCT GTGAGGCGGT CAAGGTCGGG ACGTACCACC GGGTCAAGAG CCTCGACTTC
GCCCATGTCT GTATTCCCGA CCGCAACCTC TTCCCAAAGC CGCGGCGGCC GTCCGAATCG
GCCGACGCGT TTCGCGAGCG AACCCAGTTG GAACGCCGAC AGATGTACGT GGCCATCACG
AGGGCACGAG ACAGCGTGTG GGCCGGTATC CGCGAGGTAC CCGACTCGGA CCACTCGATC
CCCGCCGAGA TCGGACACAG CTCCAGGTAG
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| Protein sequence | MLLDGPAARI PATAASTAGT STAGTSTAHP PTTASSTRDA DPLPEPSALG QAVLLGMEID
GVQRQIQHLT DVLKQLRRHR QHWEAGGRAE QSVVRVLVGM DDAGWHVLPD RRWPGTRRAN
IDVIVVGPGG VFVVDVKNWR EITVERGRLW RGDADADDDV RKLLDQTVAV EEVLVEAGLP
PTEVVPLLVL ARRKNVRAQL DRVTVLGEQD LTRDLARRGA RLAPDLVEQL LDRLARGCPP
MPRAAAVTTV TVAEAPTSRS VRRPVARRAG PSSNGTAATE SPAAIERPTQ AYCPAPAGRP
TSSEPLSPPE QSVPPDQDAL LSREELWQEL LDAAAREPIE TWMTWLHPTQ ARLAGRQWSG
PARVRGAAGT GKTVIALHRA KYLAARGERV LFTSLVRTLG PVYRALLTRM APEHVDRIEF
ATVHAVATRC LREHGLADRH QQEAADTCFW RAWGQVGQFS VLPGLGLAPG YWKDEIATVV
KGRGLTDFEQ YAKLARVGRS TPLQPTHRRA VWELYERYEQ LRTERGVLDR DDVLLLARDL
VRESSDTRYD AVIVDEVQDL TCVGLQLLHA FVGDKPDGLL VVGDGQQSIY PGGFTLAEAG
VAVVGRSTVL GRNYRNREKI LRYAQAVVAD DSFDDLDGVQ ERGRREVDVD RPGGEIREVT
VSGTVAQDAA LCEHLVEFHD NRNVRYGDMA VLVPTNAAAA RWLRVLTERG IPAVSLKEYD
GTSCEAVKVG TYHRVKSLDF AHVCIPDRNL FPKPRRPSES ADAFRERTQL ERRQMYVAIT
RARDSVWAGI REVPDSDHSI PAEIGHSSR
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