Gene Francci3_4500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4500 
Symbol 
ID3907476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5371477 
End bp5372664 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content70% 
IMG OID637881832 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_483575 
Protein GI86743175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGACG CAGGTGTGGC CGAGCTCGTC GTCGAGCCGG CGGTGCTCGG GACGCTCGTT 
GACGTGCTGC GTGCACGCGG GTATCAGGTC GTCGGCCCGA CGGTGCGGGA TGGCGCGATC
GTGTACGACA AGATCAGTAG CGCGGCGCAG CTCCCGGTGG GGTGGACCGA TGTCCAGGAG
GCGGGTCGTT ACCGGCTCGA GCGTCGTCGC GACGCGGCGC TGTTCGGTTA CGCGGTGGGG
CCGCATTCGT GGAAGCAGAA CCTGCTGCCG CCCCGGCTGC GCCTGCTGAC GACCCGCCGC
GACGGCGATG GCGGCTTCGG CGATGGCGGC TTCGGGGACG GCGGCTTCGG GGACGGCGGC
TTCGAGGTGG CGGAGGAACC GCTACCGCGG GCAGCGGTGG CATTCCTCGA CGTCCGTTCC
TGTGAGCTGC AGGCCATCGC GACCCAGGAC CGGATCCTGC TCGGGGGGCG CCACGCCGAC
CGCGACTACG CTGCTCGCCG CAGCGATGTG TTCATCGTCG CGGTGAACTG CCACGAGCCG
GGTGGGACCT GCTTCTGCGT GTCGATGAAC ACGGGCCCGG CGGTGCGGGA GGGCTACGAC
TTGGTCCTCA GCGAAGTCCT GGCCGGTGAC CACCGGCTGC TCGTCGAGGC GGGCACCCCT
CGGGGTGTCG AGATACTGGG CGAGCTGGCG GGGCGCCCGG GCGAAGCCGC CGACCGGAGC
GCGGCCCAGG CGGCCGTGGA TGGGGCGGCC GACCGGATGG GACGCACCGT CGACGCGGCC
GACCTGCGTG ACCTGCTCGC GGACAACCTC GAACATCCAC GGTGGGACGA GGTGGCGCAG
CGGTGCCTGA GCTGCGGCAA CTGCACGATG GTGTGCCCAA CCTGCTTCTG CACCTCGGTG
GAGGACGTCA GCGACCTCAC CGGAAGTGAG GCGGAGCGCT GGCGCAGCTG GGAGTCCTGC
TTCTCGCTGG ACCACTCCTA CCTCCACGGC GGCAACGTCC GTGCCTCCGG ACGCTCCCGC
TACCGCCAGT GGTTGACCCA CAAGTTCGGC ACCTGGCACG ACCAGTTCGG AACGTCCGGA
TGCGTCGGCT GCGGACGGTG CATCACCTGG TGTCCCGTCG GCATCGACGT CACCGAGGAA
CTGACCGCCA TTCGAGCGAA CTCCGCGGCC GGCGATGACG TTGGTTGA
 
Protein sequence
MTDAGVAELV VEPAVLGTLV DVLRARGYQV VGPTVRDGAI VYDKISSAAQ LPVGWTDVQE 
AGRYRLERRR DAALFGYAVG PHSWKQNLLP PRLRLLTTRR DGDGGFGDGG FGDGGFGDGG
FEVAEEPLPR AAVAFLDVRS CELQAIATQD RILLGGRHAD RDYAARRSDV FIVAVNCHEP
GGTCFCVSMN TGPAVREGYD LVLSEVLAGD HRLLVEAGTP RGVEILGELA GRPGEAADRS
AAQAAVDGAA DRMGRTVDAA DLRDLLADNL EHPRWDEVAQ RCLSCGNCTM VCPTCFCTSV
EDVSDLTGSE AERWRSWESC FSLDHSYLHG GNVRASGRSR YRQWLTHKFG TWHDQFGTSG
CVGCGRCITW CPVGIDVTEE LTAIRANSAA GDDVG