Gene Francci3_4477 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4477 
Symbol 
ID3907453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5349179 
End bp5349799 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content71% 
IMG OID637881809 
ProductHesB/YadR/YfhF 
Protein accessionYP_483552 
Protein GI86743152 
COG category[O] Posttranslational modification, protein turnover, chaperones
[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein
[COG0694] Thioredoxin-like proteins and domains 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0747916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCA CCACCCCCAC CGTCGAACTG ACCGACCGGG CCGTGAAGCA GGTCCGTCAC 
CTGCTCGCCT CGACCCCCGG CACGGGCGGG TTCAGCCTGC GGATCGGCGT CGACCCCGGT
GGCTGCGCCG GCTTCACCTA CAACCTGGCG CTCGTCCCCG GTGCCGAGGC CGAGGACGTC
GTCATCGGCC AGGACGGCTT TGACGTCGTC GTCCACTCGT CGATGGTTCA CCTGCTGCGC
GGGCTGCGCG TGGACTACAC CGAGACGCTG ACCTCCTCCG GGTTCACCTT CCAGAACCCG
AACGCGACCA GCTCCTGCGG CTGCGGGACG TCCTTCGGTG CCTCGGACTC CACCGAGCGC
ACCGCCGCGG ACGCCCGCCT GCGCGAGCAG GTCGAGGAGA TCATGGAGGA GATCCGGCCC
TTCCTGCGGG GAGACGGCGG GGACGCCGAG GTCGTCGCGA CTCTCGCCGG CAACGGCGAG
CCCGGGACGG CGGAGGTGCA CCTGCGCCTT ACCGGAGCCT GCGGCGGGTG CTCCAGCGCC
ACCGCGACCC TGACCGGCGT CATTGAGAGC CGGTTGAAGG AGGCCCTGCC CGAGATCGGC
CGGGTCGCGC TGGTGTCCTG A
 
Protein sequence
MSATTPTVEL TDRAVKQVRH LLASTPGTGG FSLRIGVDPG GCAGFTYNLA LVPGAEAEDV 
VIGQDGFDVV VHSSMVHLLR GLRVDYTETL TSSGFTFQNP NATSSCGCGT SFGASDSTER
TAADARLREQ VEEIMEEIRP FLRGDGGDAE VVATLAGNGE PGTAEVHLRL TGACGGCSSA
TATLTGVIES RLKEALPEIG RVALVS