Gene Francci3_4472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4472 
Symbol 
ID3907448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5342929 
End bp5343264 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content65% 
IMG OID637881804 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_483547 
Protein GI86743147 
COG category[C] Energy production and conversion 
COG ID[COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTG TCGTCCTGTC GCCCTGCATT GATGTCAAGG ACACCGCCTG CGTGGAGGAG 
TGCCCGGTCG ACTGCATCTA CGAGGGCAGC CGCAAGCTGT ACATCAACCC GGACGAGTGC
ATCGACTGCG GAGCCTGCGC GTCGGTCTGT CCGGTCGACG CGATCAAGAG TACCCGGATC
GTGCCGGCGA GCGAGGCCGA GTTCATCGCG GACGAGGCCC GGTTCTTCAC CGACATCCTG
CCTGGTCGGG ATGCTCCGAT CGGTAATCCG GGCGGCGCCG GCAAGATCGG CCCGATCGGA
GCGGACACCG CTTTCGTCGC GTCCTACAGA CGCTGA
 
Protein sequence
MTFVVLSPCI DVKDTACVEE CPVDCIYEGS RKLYINPDEC IDCGACASVC PVDAIKSTRI 
VPASEAEFIA DEARFFTDIL PGRDAPIGNP GGAGKIGPIG ADTAFVASYR R