Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4460 |
Symbol | |
ID | 3907436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5332594 |
End bp | 5333562 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881792 |
Product | polyhydroxybutyrate depolymerase |
Protein accession | YP_483535 |
Protein GI | 86743135 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.403398 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCC GCTTCCCCCG CACGTCTTGG TTGCTCGCCG TGTTCGTCGC TGGCGCGGTC GCCCTCACCG GCTGCTCGGG GCCGCTTCGG CGCTCCGCGG CAGGCCCGGC AGAGCCCGCC AGCACCGCGA CGGCTTCTAC GCCGGCCGCT GTCCCGGTCG GATCGTCGGT ACGGTCGATC AACGTCGGCG GCGCCACCCG CGCCTACCGG CTGTACCGGC CGCCGACTCT GCCCGCGCGG GCGCCGCTCG TCGTCATGAT CCACGGCGGT TTCGGTGGCG CGGAGCAGGC CGAGAACTCC TACGGCTGGG ACGCCGAGGC CGACCGCGGC CATTTTCTCG TCGCCTATCC CGAAGGGCAG AACCATGCCT GGTCCGTCGG CGGCGGTTGT TGCGGAAAGC CCGGTGCGAC CGGCGTGGAT GATGTCGCCT TCATCACTGG CATGGTAGCC GCCATCCAAG CCGCCGTACC GGTCGACACC GCCCGTATCT ACGCCACCGG AATCTCCAAC GGCGGCATGA TGGACTACCG GTTGGCCTGC GACACCACCA TTTTCGCCGC GATCGGACCC GATTCGGCGA CCCTGCTCGG CACCTGCCCC GCACCGCGGC CAATCTCCGT CATCGCCATT CACGGCACCG CGGACCACAC CGTACGCTAC TACGGCGGCG AGGGTGACGG GGTCGCAAAA ATCAACGGAC CGGCCGTCCC GTTCGTGAAC GCGATGTGGC GTACCGCCGA TCATTGTGCC ACCCCGGCCA CAACCACTAC GGAAAGCGTC ACCACCTTTA TCGCCACCTG CCCGCAGGGA CGGGCCGTGG AACTGGTCAC CATTGCCGGC GCGGGCCACC AGTGGCCCGG CGGTGCCCGC CACCCGACGG CCGAGCGAAT CCTGCATCTC GACCCGCCGT CAACCGCCCT GAATGCCACC GCGACCATCT GGGCCTTCTT CACCCATCAG GCAAGGTGA
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Protein sequence | MIIRFPRTSW LLAVFVAGAV ALTGCSGPLR RSAAGPAEPA STATASTPAA VPVGSSVRSI NVGGATRAYR LYRPPTLPAR APLVVMIHGG FGGAEQAENS YGWDAEADRG HFLVAYPEGQ NHAWSVGGGC CGKPGATGVD DVAFITGMVA AIQAAVPVDT ARIYATGISN GGMMDYRLAC DTTIFAAIGP DSATLLGTCP APRPISVIAI HGTADHTVRY YGGEGDGVAK INGPAVPFVN AMWRTADHCA TPATTTTESV TTFIATCPQG RAVELVTIAG AGHQWPGGAR HPTAERILHL DPPSTALNAT ATIWAFFTHQ AR
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