Gene Francci3_4458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4458 
Symbol 
ID3907434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5330352 
End bp5331353 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content70% 
IMG OID637881790 
Productadenosine deaminase 
Protein accessionYP_483533 
Protein GI86743133 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1816] Adenosine deaminase 
TIGRFAM ID[TIGR01430] adenosine deaminase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGATC TGCGTTCGCT GCCCAAGGGC CATCTGCATC TGCATTTCGA GCTGGGGATG 
CGGCCGTCGA CACTGGCCGA CCTGGCCGCC GCCGCGGGCG TTCCGACTCC CCGCACCACG
GGGTTTACCG AGTTCGGGGG CTTCAGCGAA GTGATCGCCG GCATCCTGCC GGTCTTCCGC
CGGCCCGAGG ACTTCGAACG TCTCGTCGAC GAAATGATCA TCGATGCCGC GGATGAGGGC
GTCACCTACC TCGAACCCAG CTTCTGGCCG TACGTTCATC TAGGCGTCTT CGGGAGCGCG
GAGGCCGCCT GGGAGACGGT GCTGGCCCGA TCGGATCAGG TCGGCGCGCG GTACGGGGTG
ACCGTCCGCT GGATGGCGGC CGTCGACCGG GTCTTCGACT CCCCCGAACA GGCCGTCTCC
GTGGCCCGGT TGGCCCTGCG TTACGCCGAT CGGGGCATCG TCGGCCTAGG GCTGCACAAC
GACGAGAACG GCTGGCCGCC GGAGCCGTTC ATGGCGGCGT TCCGGATTGC GCGCGACGGC
GGGTTGCTCT CGACCCCCCA CGCCGGGGAA CTCGACGGTC CCGCGTCGGT GCGTGGCGCC
ATCGAGACCC TGGATGCCGA TCGTCTCCAG CACGGTATCC GCGCCATGGA GGATCCCCGA
CTCGTCGACA CCCTCCTCGA ACGAGGGACC TGCCTCGATG TCTGCCCGAC GTCCAACCTG
CTGCTCTCGG TCGTCCCGTC GATGGCCGAA CATCCGCTTC CGGCCCTGCT GCGGGCCGGG
GTGCGATGCT CGATCAACGC CGACGACCCG CTGCTGTTCG GGCCCACCTG TCTGGAGGAG
TACGAGCTGT GCCGATCGGC GCTGGGCCTG ACCGACGAGG AACTGGCCGC CTGCGCCCGC
AGCTCGGTGG AATCCGGAGC CGCGCCGATC GAGGTGCGGA CGGCGGCCCT CGCCGGCATC
GATGCGTGGC TCGCCGACGC GGGATGTCTC GACGGCCGGT GA
 
Protein sequence
MRDLRSLPKG HLHLHFELGM RPSTLADLAA AAGVPTPRTT GFTEFGGFSE VIAGILPVFR 
RPEDFERLVD EMIIDAADEG VTYLEPSFWP YVHLGVFGSA EAAWETVLAR SDQVGARYGV
TVRWMAAVDR VFDSPEQAVS VARLALRYAD RGIVGLGLHN DENGWPPEPF MAAFRIARDG
GLLSTPHAGE LDGPASVRGA IETLDADRLQ HGIRAMEDPR LVDTLLERGT CLDVCPTSNL
LLSVVPSMAE HPLPALLRAG VRCSINADDP LLFGPTCLEE YELCRSALGL TDEELAACAR
SSVESGAAPI EVRTAALAGI DAWLADAGCL DGR