| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4446 |
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| Symbol | |
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| ID | 3907422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5313550 |
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| End bp | 5315301 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881778 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_483521 |
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| Protein GI | 86743121 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGATT CCGGGTCGGA CGGCGGCTAT GACGCCGACG TGATCGTGAT CGGGAGCGGG
TTCGGCGGCA GCGTCAGCGC GCTACGGCTC GCGGAGAAGG GCCATCGTGT CCTCGTGCTG
GAGGCCGGTC GCCGGTTCAC CCCGGACACG CTGCCGAAGA ACAGCTGGCA CGTTCGCCGG
TATCTGTGGA TGCCGCGGTT GGGCTGCCAC GGTATCCAGA AGATCACCTG GTTGGGTCGG
GTCGTGGTGC TGTCCGGAAC GGCGGTCGGT GGCGGCTCGG TCGTCTACGC GAACACGCTG
TACCGCCCGC TCGACGCCTT CTATACCGAC CCGCAGTGGC GGGACATCAC CGACTGGCGC
CGTGAGCTGG AGCCGTTCTT CGACCAGGCC GAACGCATGC TCGGGGTGAA TCCCAACCCG
ACGACGACGT ACTCCGACGA GGTGTTCCGC ACGGTCGCCG AGGAGATGCG GGTCGGGTCC
ACCTTCGCGG CGGCGCCGGT CGGTGTCTTC TTCGGCCGCG ACGGCAGCCG GGAACCCGGC
GTGCGTGTCC CTGACCCGTA CTTCGGCGGC GCCGGCCCGG CTCGGACGGG ATGCGTAGAG
TGCGGGGAGT GCATGAGCGG CTGCCGTCGA GGGGCCAAGA ACACCCTCGA CTGTAACTAC
CTGTACCTGG CCGAGCGGGC CGGTGTGCGG GTAGTCCCGG ACACCACGGT CACGGCTGTC
CGGCCACGCT CGACCGGCGG GTATGAGCTC GACATGGTCC GGACGGGGGG TCTCGTCCGG
CGTCGGCGAC GTACCCTCAC CGCGGAGCAG GTCGTGTTCG CCGCCGGCAC CCTGGGCACC
CAGCGGCTGC TGCTGGCGAT GAAACAGAGC GGTGACCTGC CGGCGTTGTC CGACCGGCTC
GGTCATCTCA CCCGGACGAA CTCCGAGGCG ATCCTGGGCG CATCCAGGCT GCGCCCCGAT
CAGCGGATCG CCCGGGGAGT CGCGATCACC TCGTCCTTCC ACCCCGACGA GCACACCCAC
ATCGAACCCG TGCGCTACGG CCGGGGGAGC AACCTGATGG CACTGATCAG CGCGTCGATG
ACCGACGGCG GCGGGCGGGT GCCGCGCTGG CTGAAATACC TGCGTCAGGT CGTGCTCCAC
CCACATCAGG CGCTGGCGTC GTCACTGCCC TGGCGATGGT CCGAGCGGAC CATCATTGCG
CTGGTCATGC AGTCGTGGGA CAACTCGTTG ATCGTCTCCC TGCGCCGTGG GCCGTTCGGT
CTCGGCTGGC TGACGAGTCG GCAGGGACAC GGTGAGCCGA ACCCCTCCTG GATCCCGGAG
GGCAACGATG CCGCCCGCCG GATCGCGGCC AGGATGGGCG GCTACCCCGG CGGGTCGATC
GGCGAGATCG CCAACATCCC GCTGACCGCG CACATCCTCG GCGGGGCCCC CATCGGCACG
GATCCCACCA CCGGAGTGAT CGATCCCTAC CACCGGGTCT TCGGATACGA GGGGCTGCAC
GTCGTCGACG GCGCCGCGGT CTCGGCGAAC CTCGGCGCGA ACCCGTCGTT GACCATCACT
GCGCAGGCCG AACGGGCGAT GTCCTTCTGG CCGAACAAGG GGGAACCCGA CCCGCGCCCA
CCTCTCGGGG CGGCCTACCG GCCGGTTGCG CCGAGAGCAC CGGCGCACCC CGCCGTCCCA
GCCGGCGCTC CCGGGACCTA CCGCGTGGTC GGCCCGGTCG GCCCGGTCGG ACCGGTCGCG
GGGACGAGGT GA
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| Protein sequence | MADSGSDGGY DADVIVIGSG FGGSVSALRL AEKGHRVLVL EAGRRFTPDT LPKNSWHVRR
YLWMPRLGCH GIQKITWLGR VVVLSGTAVG GGSVVYANTL YRPLDAFYTD PQWRDITDWR
RELEPFFDQA ERMLGVNPNP TTTYSDEVFR TVAEEMRVGS TFAAAPVGVF FGRDGSREPG
VRVPDPYFGG AGPARTGCVE CGECMSGCRR GAKNTLDCNY LYLAERAGVR VVPDTTVTAV
RPRSTGGYEL DMVRTGGLVR RRRRTLTAEQ VVFAAGTLGT QRLLLAMKQS GDLPALSDRL
GHLTRTNSEA ILGASRLRPD QRIARGVAIT SSFHPDEHTH IEPVRYGRGS NLMALISASM
TDGGGRVPRW LKYLRQVVLH PHQALASSLP WRWSERTIIA LVMQSWDNSL IVSLRRGPFG
LGWLTSRQGH GEPNPSWIPE GNDAARRIAA RMGGYPGGSI GEIANIPLTA HILGGAPIGT
DPTTGVIDPY HRVFGYEGLH VVDGAAVSAN LGANPSLTIT AQAERAMSFW PNKGEPDPRP
PLGAAYRPVA PRAPAHPAVP AGAPGTYRVV GPVGPVGPVA GTR
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