| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4442 |
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| Symbol | |
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| ID | 3907418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5308495 |
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| End bp | 5310402 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637881774 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_483517 |
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| Protein GI | 86743117 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.807083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.234797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACATT CACCGGTGCG GCGCAGCGGG GGCAGTCCCT TCCCGCCGAT CGCCGAGTAC
GGATTCCTGT CCGACTGTGA GACGTCCTGT CTCGTTGCCC CCAGCGGCAA CGTCGAGTGG
ATGTGTGTGC CCCGGCCCGA TGCCCCGAGT GTCTTCGGGT CGGTGCTGGA CCGGTCGGCC
GGGGGCTTCC GTTTCGGTCC CGAGCGTACG CAGATCCCGG CCGGCCGGCG CTACCTCCCC
GGGACGAACA TTCTCGAGAC CACCTGGCAG ACGCCGAACG GCTGGCTCAT CGTCACCGAT
TGCCTGGTGG TCGGGCGCTG GCATCGCACC CACAAGCGTT CGAACACGCA CCGTCGGACG
CCGAGCGACT GGGACGCCGA CCACGTGCTG CTCCGGCTGG CTCGCTGTGA GCACGGCTCG
GTGGATCTCA GCCTGGTGTG CGAGCCGAAC TTCGACTACG GCCGTGAGCC CGAGTCCTGG
CAGTACGAGG GAGAGGATTA CTCCTCCGGC GTGATCAGCC ATGCGGGCAC CAACGTCACG
CTGCGGCTGC GTACCGACCT GCGGCTCGGT TTCGACGGCC GGCGGGCACT GGCTCGCACC
ACGCTGCGGG AGGGGGACAC CGCGTTCGTC GCGCTCACCT GGCGCCCGGA GGAGCCCCTG
CTTCCGGACA CCTACCTGCA GGCGTGCGTC GCCGTCGACC GGACAACGGA GTTCTGGCGC
CAGTGGCTGT CGCGGGGAAT GTTTCCCGAC CATCCCTGGC GGCGCCATCT GCAGCGCAGC
GCCCTCGCGC TGAAAGGACT GACCTACGCG CCGACCGGTG CTCTGCTCGC CGCCTCGACC
ACCTCGTTGC CGGAGACCCC GCGCGGCGAA CGGAACTGGG ACTACCGATA CAGCTGGATC
CGCGATTCCA CCTTCGCGCT GTGGGGCCTG TACACCCTCG GGCTGGACTA CGAGGCCAAC
GATTTCTTCT CGTTCATCGC CGACGTCGCC GAGAACGATG ACGACGACAT CCAGGTGATG
TACCGGGTGA GCGGCGAGCC GAAGATCGAC GAGGAGGTCC TCGGTCACCT GTCCGGCTAC
GAGGGAGCCT ACCCGGTACG GATCGGCAAC GCAGCGGCAC TGCAACGTCA ACACGACGTC
TGGGGTGTCG TTCTCGACTC CGTGTACCTG CACACCAAGT CCCGTGACTA CCTCTCCGAA
CGGCTCTGGC CGGTGCTCGT GCGCCTCGTC GAGGCGGCGG CCACGCACTG GCGGGAGCCG
GACCGCGGGA TGTGGGAGGT GCGCGGGGCG CCGCAGCACT TCACCGTGTC CAAGATGATG
TGCTGGGTTG CCCTGGACCG GGGTCGGCGG CTGGCGCAGA TGCGGGGGGA CGCCAAGACG
GCGGCGCGCT GGCGGGCCGT GGCGGAGGAG ATCCACGCCG AGGTGTGCGA GAAGGGTGTG
GATCATCGCG GTGTGTTTAC CCAGTACTAC GGATCGAAGG CGCTCGACGC CTCACTGCTC
CTGATTCCGC TGCTCGGGTT CCTGCCGGCG GCCGACGAAC GCGTGAAGGC CACCGTGCTC
GCGATCGCCG ACGAGCTGAC CGTTGACGGG CTGGTCCTGC GCTACCGCAC GGAGGAGACC
GACGACGGGG TCTCCGGCAC CGAGGGCGCC TTCCTGATCT GCTCGTTCTG GCTGGTCTCC
GCCCTGGTGG AGATCGGCGA GCTGACCCGT GCCCGGCAGC TGTGTGAACG GCTGCTGAGC
CTCGCCAGCC CGCTGGATCT CTATGCCGAG GAGATCGATC CGGTCAGTGG CCGCCATCTC
GGAAACTTCC CCCAGGCGTT CACCCATCTG GCCCTGATCA ACGCGGTGAT GTACGTGATC
AGGGCCGAGG ACGCCGAGGC CTACGCCCGG CCGTCCCCCT CGACCTGA
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| Protein sequence | MAHSPVRRSG GSPFPPIAEY GFLSDCETSC LVAPSGNVEW MCVPRPDAPS VFGSVLDRSA
GGFRFGPERT QIPAGRRYLP GTNILETTWQ TPNGWLIVTD CLVVGRWHRT HKRSNTHRRT
PSDWDADHVL LRLARCEHGS VDLSLVCEPN FDYGREPESW QYEGEDYSSG VISHAGTNVT
LRLRTDLRLG FDGRRALART TLREGDTAFV ALTWRPEEPL LPDTYLQACV AVDRTTEFWR
QWLSRGMFPD HPWRRHLQRS ALALKGLTYA PTGALLAAST TSLPETPRGE RNWDYRYSWI
RDSTFALWGL YTLGLDYEAN DFFSFIADVA ENDDDDIQVM YRVSGEPKID EEVLGHLSGY
EGAYPVRIGN AAALQRQHDV WGVVLDSVYL HTKSRDYLSE RLWPVLVRLV EAAATHWREP
DRGMWEVRGA PQHFTVSKMM CWVALDRGRR LAQMRGDAKT AARWRAVAEE IHAEVCEKGV
DHRGVFTQYY GSKALDASLL LIPLLGFLPA ADERVKATVL AIADELTVDG LVLRYRTEET
DDGVSGTEGA FLICSFWLVS ALVEIGELTR ARQLCERLLS LASPLDLYAE EIDPVSGRHL
GNFPQAFTHL ALINAVMYVI RAEDAEAYAR PSPST
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