Gene Francci3_4432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4432 
Symbol 
ID3907408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5297199 
End bp5298608 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content71% 
IMG OID637881764 
Productprotein serine/threonine phosphatases 
Protein accessionYP_483507 
Protein GI86743107 
COG category[T] Signal transduction mechanisms 
COG ID[COG0631] Serine/threonine protein phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.35733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTCA GGCTTCACTT CGCCGTCCGC TCGGATGTCG GGCACGTACG GGAAGGAAAC 
GAAGATTCAG CCTATGCCGG GCTCCGCCTG CTGGCGGTGG CCGACGGCAT GGGTGGTCAT
GCCGCGGGGG AGGTCGCCAG CTCAACGGTG ATCTCCCGCC TGGCGGATCT CGACGACGCG
ATCGACAGCG ACGATCTCGT GACGGAGCTG AACGAGGCCG TCCGGGACGC CAATCGGCAG
CTGCGCGAGA TGTCGCTGGA GAACAGCGCG CTGGACGGCA TGGGCACCAC GGTGACCGCC
GTGCTCTCCT CCGGTGACAT GCTCGGGGTG CTGCACGTCG GCGATTCCCG GGCCTACCTG
CTGCGCGACG GCGTCCTCAG CCAGGTCACC CACGATCACA CCCTGGTGCA GGATCTCGTG
GACCAGGGTC GGATCACCCC CGAGCAGGCG AACACCCATC CGCAGCGCTC GCTGCTGATG
CGGGCGCTCG ACGGTCGGGA GGTCGAGCCC GATCTCTCCG TGCGCCAGGC GATCGCGGGA
GACCGCTACT TGCTGTGCAC CGACGGCCTG TCGGGGGTGG TGAGCGAGGA GACAATCCTC
GAGACGCTGC TGCTGCCCAC CCCGCAGGAG GCGGTCGACC AGCTGGTCGA CCTGGCCCTC
AAGGGCGGCG GCCCGGACAA CATCACCGTC GTGGTCGCCG ACATCGAGGA GGACCACGGC
GAGGCGGAGC CCTATCCCCT CGTAGCCGGC GCGGCGGCCG AGAAGCGGGC GGTTCCCGGC
GCGTCGCCGG CCCGCAGCGG GCCGAATCCC CAGTACCCCG ACCACGAGTC CGCGGCGGCG
AAGGCGGCCC GTATCGGTCG GCCGGGCTTC CACCGGCGGG ACCGCCAGGC GCAGGCCAGC
GATCGGGGCG ACGACGACGG CGACGACTCC GACCCGGAAG GATCCGGGGG ACGGCGCTCC
GGGCGGCGGG TCCTGTTCGT CTCCACCGTG GTGTTCGTGC TCATCGCGGC CGGTGCCGCG
GCCGGGTGGA CCTACGTGCG CGGGCAGTAC TATGTCGGCG TCGACGACGA ACACGTCGCC
CTCTTCCAGG GAGTGAAGGG CATTCCGCTG TCCTCGGTGG TACTCCCCCG CCGTCAGCCA
CTGTCGGAGG TTGCGGAGCC CGATCAGGCG GAGCTCCGAC GAGGCATCCG CGCCGGCAGC
CGCGACGATG CGGAAAAGAT CATCTCGCGC CTACGGACCC CGGCCACGCC CTCCGTACGC
CCGAGTCCGA GTCCGACCGA CCGTTCCAAG GTGCCGTCGG GCACCTCGGG CTCCTCCCTC
CTGTCCACCG CCCTGTGCCA GCCGGCGACC GGTGCCGGCG TCACGGTCCC GGGATGCCCG
ACCACACCCG TCCCCACCCC CTCACCGTGA
 
Protein sequence
MSLRLHFAVR SDVGHVREGN EDSAYAGLRL LAVADGMGGH AAGEVASSTV ISRLADLDDA 
IDSDDLVTEL NEAVRDANRQ LREMSLENSA LDGMGTTVTA VLSSGDMLGV LHVGDSRAYL
LRDGVLSQVT HDHTLVQDLV DQGRITPEQA NTHPQRSLLM RALDGREVEP DLSVRQAIAG
DRYLLCTDGL SGVVSEETIL ETLLLPTPQE AVDQLVDLAL KGGGPDNITV VVADIEEDHG
EAEPYPLVAG AAAEKRAVPG ASPARSGPNP QYPDHESAAA KAARIGRPGF HRRDRQAQAS
DRGDDDGDDS DPEGSGGRRS GRRVLFVSTV VFVLIAAGAA AGWTYVRGQY YVGVDDEHVA
LFQGVKGIPL SSVVLPRRQP LSEVAEPDQA ELRRGIRAGS RDDAEKIISR LRTPATPSVR
PSPSPTDRSK VPSGTSGSSL LSTALCQPAT GAGVTVPGCP TTPVPTPSP