Gene Francci3_4430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4430 
Symbol 
ID3907406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5295376 
End bp5296698 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content73% 
IMG OID637881762 
ProductFHA domain-containing protein 
Protein accessionYP_483505 
Protein GI86743105 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.206404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGTGC TACAACGCTT CGAACGGCGC CTGGGCGGCC TCGTCGAGGG TGCGTTCGCG 
AAGGTGTTCA AGGGCGGAGT CGAGCCCGTC GAGATCGCCA GCGCGTTGGC CCGGGAAACC
GACGATCGGC GGGCGGTCAG TTCGAACCGG GTGCTGGTGC CCAACGAGTT CGCCGTCGAG
CTCGCCGGCG GCGACTTCGC CCGGCTCGCC CCCTACGACC GGGCGCTGTG CGACGAGCTC
GCCGAGATGG TTCGCGAGCA TGCGGCCGAG CAGCGTTACA CCTTCGTCGG CCCGGTGTCC
GTGCGGATGT CCGAGGCCAC CGATCTCGAT GTCGGCGTCT TCCGGGTCCG CAGCAGCGTG
GCCGCCGCGG ACCCGGGAGC GGTGACTGAA CGGCGCGCAC GCCCTCCCCG ACCGGGCGCT
CCCGGCACCC CGCACCTCGT CATTACCACG AAGGCCCCGG GAGGGCCCGC GGGCGGAGGG
GAACGGGAGT ATCCCTTGGA CGCCGAGACG ACCGTGATCG GCCGCAGCGT CGAGTGCGAC
ATCCGCCTGA ACGACACCGG TGTGTCTCGT CGCCACGGCG AGATACGCCG GCTTCCCGAC
GGGCAGTTCC TCTACGTCGA CGCCGGGTCC ACCAACGGCA GCCTGGTCAA CGGTCGCGCG
GCGACGCAGG TCAAGTTGGT CAACGGGGAC AAGATCGAGC TCGGTACCGC GACGATCGTC
TTCCGTCGCG AGGACGGGCG GGGGAATGGT CCGGCGCGCG TGGGCGCCCG TGGAACACCT
CCGCCGGCCC AGGCCGGGGG CCGGGAGACC ATCCCGCCGG ACCGCCGTCC CACGCCCGCG
CCGGACGACC CGTACCGGCG CGGCTCGTCG CCACACGCCG GCCGTGTCGA CCCGTACGCC
GATCGTGATC GGCGCGGTGG GCCGGGGTAC CGGGACGATT CATACCAGAA CCGGAGGGAC
CCGTACCGGG ACCGGACACC GGAACGGGAT CACGGCTACG ACCAGCCGTG CGACCACGGT
GGTCGTGACC CCTATCACCG TGACCCCCGT GACGGGCGTG AGGGACGAGC CGACGCTCCT
CGGCGAGCCG ACGCTCCTCG GCGAACCGAC GCTCCTCGGC GAGCCGACGC TCCTCGGCGA
GCCGACCCCT ACCGCGAGCC GAGCAACCCC GGCCGCCGGC CCGGCTCCGG TTCGCCGCCC
GATGGGCTCG AACCCCTCGA CGACGTGTAC GACGCCGACA CGGAGCTCCC CGGCCGCGCC
GCCGCGGAGC CTCCCGGCGG GGATGGTCGA CGTGGCCGGC CCAGATCGGC TCGAGGCTGG
TAG
 
Protein sequence
MGVLQRFERR LGGLVEGAFA KVFKGGVEPV EIASALARET DDRRAVSSNR VLVPNEFAVE 
LAGGDFARLA PYDRALCDEL AEMVREHAAE QRYTFVGPVS VRMSEATDLD VGVFRVRSSV
AAADPGAVTE RRARPPRPGA PGTPHLVITT KAPGGPAGGG EREYPLDAET TVIGRSVECD
IRLNDTGVSR RHGEIRRLPD GQFLYVDAGS TNGSLVNGRA ATQVKLVNGD KIELGTATIV
FRREDGRGNG PARVGARGTP PPAQAGGRET IPPDRRPTPA PDDPYRRGSS PHAGRVDPYA
DRDRRGGPGY RDDSYQNRRD PYRDRTPERD HGYDQPCDHG GRDPYHRDPR DGREGRADAP
RRADAPRRTD APRRADAPRR ADPYREPSNP GRRPGSGSPP DGLEPLDDVY DADTELPGRA
AAEPPGGDGR RGRPRSARGW