Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4430 |
Symbol | |
ID | 3907406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5295376 |
End bp | 5296698 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881762 |
Product | FHA domain-containing protein |
Protein accession | YP_483505 |
Protein GI | 86743105 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.206404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGTGC TACAACGCTT CGAACGGCGC CTGGGCGGCC TCGTCGAGGG TGCGTTCGCG AAGGTGTTCA AGGGCGGAGT CGAGCCCGTC GAGATCGCCA GCGCGTTGGC CCGGGAAACC GACGATCGGC GGGCGGTCAG TTCGAACCGG GTGCTGGTGC CCAACGAGTT CGCCGTCGAG CTCGCCGGCG GCGACTTCGC CCGGCTCGCC CCCTACGACC GGGCGCTGTG CGACGAGCTC GCCGAGATGG TTCGCGAGCA TGCGGCCGAG CAGCGTTACA CCTTCGTCGG CCCGGTGTCC GTGCGGATGT CCGAGGCCAC CGATCTCGAT GTCGGCGTCT TCCGGGTCCG CAGCAGCGTG GCCGCCGCGG ACCCGGGAGC GGTGACTGAA CGGCGCGCAC GCCCTCCCCG ACCGGGCGCT CCCGGCACCC CGCACCTCGT CATTACCACG AAGGCCCCGG GAGGGCCCGC GGGCGGAGGG GAACGGGAGT ATCCCTTGGA CGCCGAGACG ACCGTGATCG GCCGCAGCGT CGAGTGCGAC ATCCGCCTGA ACGACACCGG TGTGTCTCGT CGCCACGGCG AGATACGCCG GCTTCCCGAC GGGCAGTTCC TCTACGTCGA CGCCGGGTCC ACCAACGGCA GCCTGGTCAA CGGTCGCGCG GCGACGCAGG TCAAGTTGGT CAACGGGGAC AAGATCGAGC TCGGTACCGC GACGATCGTC TTCCGTCGCG AGGACGGGCG GGGGAATGGT CCGGCGCGCG TGGGCGCCCG TGGAACACCT CCGCCGGCCC AGGCCGGGGG CCGGGAGACC ATCCCGCCGG ACCGCCGTCC CACGCCCGCG CCGGACGACC CGTACCGGCG CGGCTCGTCG CCACACGCCG GCCGTGTCGA CCCGTACGCC GATCGTGATC GGCGCGGTGG GCCGGGGTAC CGGGACGATT CATACCAGAA CCGGAGGGAC CCGTACCGGG ACCGGACACC GGAACGGGAT CACGGCTACG ACCAGCCGTG CGACCACGGT GGTCGTGACC CCTATCACCG TGACCCCCGT GACGGGCGTG AGGGACGAGC CGACGCTCCT CGGCGAGCCG ACGCTCCTCG GCGAACCGAC GCTCCTCGGC GAGCCGACGC TCCTCGGCGA GCCGACCCCT ACCGCGAGCC GAGCAACCCC GGCCGCCGGC CCGGCTCCGG TTCGCCGCCC GATGGGCTCG AACCCCTCGA CGACGTGTAC GACGCCGACA CGGAGCTCCC CGGCCGCGCC GCCGCGGAGC CTCCCGGCGG GGATGGTCGA CGTGGCCGGC CCAGATCGGC TCGAGGCTGG TAG
|
Protein sequence | MGVLQRFERR LGGLVEGAFA KVFKGGVEPV EIASALARET DDRRAVSSNR VLVPNEFAVE LAGGDFARLA PYDRALCDEL AEMVREHAAE QRYTFVGPVS VRMSEATDLD VGVFRVRSSV AAADPGAVTE RRARPPRPGA PGTPHLVITT KAPGGPAGGG EREYPLDAET TVIGRSVECD IRLNDTGVSR RHGEIRRLPD GQFLYVDAGS TNGSLVNGRA ATQVKLVNGD KIELGTATIV FRREDGRGNG PARVGARGTP PPAQAGGRET IPPDRRPTPA PDDPYRRGSS PHAGRVDPYA DRDRRGGPGY RDDSYQNRRD PYRDRTPERD HGYDQPCDHG GRDPYHRDPR DGREGRADAP RRADAPRRTD APRRADAPRR ADPYREPSNP GRRPGSGSPP DGLEPLDDVY DADTELPGRA AAEPPGGDGR RGRPRSARGW
|
| |