Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4425 |
Symbol | |
ID | 3907400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5290302 |
End bp | 5292143 |
Gene Length | 1842 bp |
Protein Length | 613 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637881756 |
Product | serine/threonine protein kinase |
Protein accession | YP_483500 |
Protein GI | 86743100 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.373285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACAGCG GTCGTGATCA CAGCCGTGCG GTGCTGACCG TGGCCGACAA CGCCGCACGC ATGGGTCCCG GCCGCTCCGA ACCAGGTGAT CCGCTCAATC CACACGAGCC CCGGTCGGTC GGCCCCTACG TTCTGCTCAG CCGGCTCGGG GTCGGCGGCA TGGGCACGGT CTACCTGGCG AGGAACCGGG CCGGACGGCG GGTTGCCATC AAGGTCATCA GACCGGACCT GGCCGCCGAC GAGGAGTTCC GCCGCCGGTT CCGGGCCGAG GTCGAAGCGG CACGCAAGGT TGCTCCCTTC TGCACCGCCG AAGTCCTGGA CGCGGATCCG AATGCGCCCG CGCCGTACCT CGTCACCGAG TTCATCGACG GCGTCCGGCT GGACATGCAG GTCGACAAGG GCCCGCTGAC CTCGTCGACC CTGACCGGAC TGGCCGTGGG GGTCGCGACG GCGCTCACCG CGATCCACAG CGCCGGCCTC GTCCATCGGG ATCTCAAGCC CAGCAACGTG ATGCTCTCAC TGTCCGGGCC ACGCGTGATC GATTTCGGGA TCGCGCAGGC CCTCGAGGGC GCGAAGGCGA AGCCCACGGC ATGGGGCTTC GGCTCCGCCG GGTGGATGGC GCCCGAGCAG GTGCACGGCC AGCCCATCGG TCCGGAGGCG GACGTCTTCG CCTGGGGCAT CCTCATTGCC TACGCTGGTA CCGGCCGCCA CCCGTTCGGC GACGGTACGG ACATCGACCT CGGCATGCGC ATCGTCGGGT CCGCCCCGGA CCTGCGCGGT CTGCCGCAGC CACTGGTCGG CCTGGTCAGC GCGGCCCTGG CCAAGCATCC CGACGACCGG CCGAGCGCCC GGGACCTGCT GCTGCGGCTC ATCGCGCAGC CACCCTCCCG CGGTACCGGT GCCATCGGCG AGGCGATGGG TCAGGCCGAG GAGCTCCTGA GCAGAACCGG CGAGGTGCCC CGCGCCGCCC CGACCCGGAT CGGCCCGGCG ACCTCGGCTC CCGCGCGTCA GGTCCACTGG AACGCGGGCG CTCCCGCCGC CCGGGCGGGC CAGGGACCGG GACAACCACG CCAGGCACCA CCGGGGCAGT CCGGTGCGCA CAGCCCGAGG GGACGCCCCG GCCCGCGGCC CGCCCAGCTG GGCGAGCGGA TGGGTGGGCA GGTCCCCGGC GCGCCGCCGG GGCCGTGGTC CGGCCAGGCT CCCGATCGGC ACGGGCCGGT ACCGGGCGAG CCCGGCGCGC CGTACCCGTC CTTCGCCCAG CCGCCGCCGG CCCGCGGGCT CGATCGCAGG CGACTCGTCT GGATCGCCGT CATCGTCCTG GGCGCGCTGA TCGCCATCGC GGTCGTGGTC AGCCTGCCCG GAAAGAGCGG CCAAAATGGT TCCGCGGAAC AGTCGGCGGC CACGACCGTC CCGTCGCGCT CCACCGGTCC GAGCACGGCA CCGGGTCCGG CCAGCGGCCT GAACCGCCCC GTCACGGATG GCCAGCTCGA GTTCATCGTG GATTCCTTCC GATGCGGGCA GACCAAACTC GGTGACGGAC TGCTCGCTCG GCACACGGAC GGCCAGTTCT GCCTGGCCCA CGTGACCGTG CGCAACATCG GCGACTCCAC CCGCACGCTG GTGACCTCAT CCCAGTTTCT GTGGGACGGC GGCGGCGGCC GGCACAGCGC CGATTTCCTC GCCCGCTTCC AGCTGAGTAA CGAGGATCTG TGGGATTCGA TCAACCCGGG TGACCTCAGA GCGGGCACCA TGGTCTTCGA CATCCCACGG GACGCCACGG CCCAGGAGTT GGAGCTGCAC GACAATCCGG TGAGCGCGGG AGCCCGCGTT CCCGTCCCCT GA
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Protein sequence | MDSGRDHSRA VLTVADNAAR MGPGRSEPGD PLNPHEPRSV GPYVLLSRLG VGGMGTVYLA RNRAGRRVAI KVIRPDLAAD EEFRRRFRAE VEAARKVAPF CTAEVLDADP NAPAPYLVTE FIDGVRLDMQ VDKGPLTSST LTGLAVGVAT ALTAIHSAGL VHRDLKPSNV MLSLSGPRVI DFGIAQALEG AKAKPTAWGF GSAGWMAPEQ VHGQPIGPEA DVFAWGILIA YAGTGRHPFG DGTDIDLGMR IVGSAPDLRG LPQPLVGLVS AALAKHPDDR PSARDLLLRL IAQPPSRGTG AIGEAMGQAE ELLSRTGEVP RAAPTRIGPA TSAPARQVHW NAGAPAARAG QGPGQPRQAP PGQSGAHSPR GRPGPRPAQL GERMGGQVPG APPGPWSGQA PDRHGPVPGE PGAPYPSFAQ PPPARGLDRR RLVWIAVIVL GALIAIAVVV SLPGKSGQNG SAEQSAATTV PSRSTGPSTA PGPASGLNRP VTDGQLEFIV DSFRCGQTKL GDGLLARHTD GQFCLAHVTV RNIGDSTRTL VTSSQFLWDG GGGRHSADFL ARFQLSNEDL WDSINPGDLR AGTMVFDIPR DATAQELELH DNPVSAGARV PVP
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