Gene Francci3_4424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4424 
Symbol 
ID3907399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5289427 
End bp5290185 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID637881755 
Producthypothetical protein 
Protein accessionYP_483499 
Protein GI86743099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.323203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAGAA GCGGTGTCGG TCCAGATCGT CACGGACCCG GTCGGCCCGG TCGACCCGGC 
GGAGCCGCGG CCCTCGCCGT CCTCGCCGTT TTCGTCCTCG TCGGCGGCCT GACCGGTTGC
AGTGACCTTT CCGACCAGAC CGGAACGTCC AACCAGGTTG GTGCCCCGAC CGCCAGCGGC
TCGGCGCTGA AGCTGCTCGC CACCCTTCCG ATCAAAGCGG AGGACAACTC TCCCAGGTAC
CGCCGGGACG AGTTCGGGCC CGCCTGGTCG GACATCGACG ACAACGGGTG TGACACCCGT
AACGACATTC TGCGGCGAGA TCTGCGCAGC ACCACCATCC GCAGATCGGA CGGCTGCACG
GTGCTGACCG GCGAGCTCCG GGATCCGTAC ACCACCAGAA TCATCCGTTT CGACCGTGGA
CGGAACTCCG CCAGCGTGCA GATCGACCAC GTCGTCCCCT TGGCGGATGC GTGGCGGACC
GGCGCGCTCA ACTGGACCGC TCGGGAACGG CTCCAGTTCG CCAACGATCC GGAGAACCTG
CTGGCTGTCG ACGGTCCCAC GAATCAGCGC AAGAGCGATC ACGACGCCGC CGAATGGTTG
CCGCCGAGCC CGGGGGAGCA GTGCCCCTAC GTCGCGCGCC AGGTGGGATT GAAGGCCCGT
TACCGCCTGT GGGTCGTCCA GGCGGAGGCG GACGCGATGC GCGCCGTTCT CCAGAAGTGC
CCGAACCAGC CGGCACTGGG GCTGACCCCG AGCGGCTGA
 
Protein sequence
MRRSGVGPDR HGPGRPGRPG GAAALAVLAV FVLVGGLTGC SDLSDQTGTS NQVGAPTASG 
SALKLLATLP IKAEDNSPRY RRDEFGPAWS DIDDNGCDTR NDILRRDLRS TTIRRSDGCT
VLTGELRDPY TTRIIRFDRG RNSASVQIDH VVPLADAWRT GALNWTARER LQFANDPENL
LAVDGPTNQR KSDHDAAEWL PPSPGEQCPY VARQVGLKAR YRLWVVQAEA DAMRAVLQKC
PNQPALGLTP SG