Gene Francci3_4419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4419 
Symbol 
ID3907394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5284654 
End bp5286255 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content72% 
IMG OID637881750 
Producthypothetical protein 
Protein accessionYP_483494 
Protein GI86743094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.438788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCTGG GCAGCACAGT GGTGAACAGC CTGCGCCGGC TGCGGGCGAG TGTGCGCGGC 
AATGACGCCG ACCGGTCGGG GCTGTCGTCG CTGACGGAGC TGTCGTTCGT CAACGCCGCC
GGGGACGCGC TGGTGACCGT CGCGTTGGCG GGTTCGCTGT TCTTCGCCGT CCCGTCCGGC
GAGGCCCGGT CGAAGGTCGC CCTCTACCTA CTGGTCACCA TGGTGCCGTT CGCCCTGCTG
GCGCCGGTCA TCGGTCCACT GCTGGACCGG GTGGCCTACG GTCGGCGGAC GGCGCTCGCC
GCCATCTGCC TGGGCCGCGG GCTGCTGGCG TGGCAGCTCG CGGGGGCACT CGACGGGCTG
GCCGTCTACC CCCTCGCGCT CGGCCTGCTC GTGCTCTCCC GCGGGTTCGG CGTCGCGCGC
AGCGCCGTCA TTCCCCGGGT GGCCCCGGCG GAACTCACGC TCGTCACGAT CAACTCACGG
ATCTCGCTGG TAAACATCGT CGCCGGGGCG GTCGTGGCAC CCGTCGGGCT GGGCATCGCC
AACATCCCTT TCGTCGGCTA TCCCTGGGTG TTGCGAATCT GTGCCCTCGT CTACATGGCC
GGGGTCCTAC TGGCGTTCAA CCTGCCCGGG CACGTCGACT CCGCCGCCGG TGAGCAGCCG
CTGCGCGGCC CGCTTCCCTC AAGCGTGGCC CGGCGCGGCG TCGGGGCGCG GATCCGGGCG
TTCCTCGGCA CGCTGCCGGT GGCGCTGCGC GCCGCCCTGG TGCTACGCAG TCTGGTCGGC
TTCCTGACGT TCTATCTGGC GTTCCTCCTG CGCACCAACG GCGGGAACAA CCTGTGGCTG
GGCGGGCTCG CGGTCTGCGC GGGCGCCGGC AGCGGCCTGG GAGTCTTCAT CGGCGGCCGG
CTCGGCCGGC GCCGTCCCGA GGGCATCCTC ATGCTCGCGC TGGTGTTGGC GGCAGGGGGA
TGCCTCGGTG CGGCGATCAC CTACACCAAG TTCACCTCGC TGGTCGCCGC GCTGCTGGCG
TCCATGGCGG GGTCGATGGG GAAGCTGGCG CTGGACGCGA TCATCCAGCG GGACATCCCG
GAGACCACCC GCAACTCCGC GTTCGCCCGC TCTGAGACCG GTCTGCAGCT GGCCTGGGTC
GCCGGCGGGG GCCTCGGACT GATCGAGATG CCCGGGACGG TCGGCTTCGC GGTGGCCGCG
GCGGCGATGG GGATCACGTT GTTCGTGGAG GCCGGCGCGC TGCGTCGGTC CCGGCTGGCC
GCCCGCACCC AGTTCCGCGC GGACACCCGC AACCGCCCAC CCGCCCACAA CGATCCGGAC
ACAACGAAAC CACTCGGTCA CCCAGGGGTT CCCCCGCAGG CACCCATGCC CCCGCCGATA
CCGATGCCCA CACCGACACC CATGCCCACA CCGACACCCA TGCCCACACC GACACCCATG
CCCCCGTCGG CCCACGCGAC CGCGTCAACG CCGCTGCCAC CGGCCGACCC GTGGCGGCAG
GCCCCACTCC CCATTCCGGC GACGCTCCAG GATCCGACCG GTCCGACCCG GCCTGACCGC
CGACGAACGG CCCGCGGCCT CCGATGGCGG CGCCGGAACT GA
 
Protein sequence
MNLGSTVVNS LRRLRASVRG NDADRSGLSS LTELSFVNAA GDALVTVALA GSLFFAVPSG 
EARSKVALYL LVTMVPFALL APVIGPLLDR VAYGRRTALA AICLGRGLLA WQLAGALDGL
AVYPLALGLL VLSRGFGVAR SAVIPRVAPA ELTLVTINSR ISLVNIVAGA VVAPVGLGIA
NIPFVGYPWV LRICALVYMA GVLLAFNLPG HVDSAAGEQP LRGPLPSSVA RRGVGARIRA
FLGTLPVALR AALVLRSLVG FLTFYLAFLL RTNGGNNLWL GGLAVCAGAG SGLGVFIGGR
LGRRRPEGIL MLALVLAAGG CLGAAITYTK FTSLVAALLA SMAGSMGKLA LDAIIQRDIP
ETTRNSAFAR SETGLQLAWV AGGGLGLIEM PGTVGFAVAA AAMGITLFVE AGALRRSRLA
ARTQFRADTR NRPPAHNDPD TTKPLGHPGV PPQAPMPPPI PMPTPTPMPT PTPMPTPTPM
PPSAHATAST PLPPADPWRQ APLPIPATLQ DPTGPTRPDR RRTARGLRWR RRN