Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4417 |
Symbol | |
ID | 3907392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5281320 |
End bp | 5283605 |
Gene Length | 2286 bp |
Protein Length | 761 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881748 |
Product | phosphoribosylformylglycinamidine synthase II |
Protein accession | YP_483492 |
Protein GI | 86743092 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain |
TIGRFAM ID | [TIGR01736] phosphoribosylformylglycinamidine synthase II |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.39231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACCGGCA ACCCCGCCGC CCCCGCGGCC ACCTCCGTGA GTCCCCCCGC CGAGCAGCCC TACCAGGAGC TGGGGCTCAC CGACGACGAG TACGCCCGGA TCATCGCGAC CCTCGGTCGC CGGCCCAGCG ACGCCGAACT CGCGATGTAC TCGGTGATGT GGAGCGAGCA CTGCTCCTAC AAGTCCTCCA AGGTGCATCT GCGGCAGTTC CGGGACACCC CGTTGACGGA CCGGCTGCTG GTGGGCATGG GGGAGAACGC GGGCGTCGTC GACGTCGGCG AGGGGCTGGC GGTCACCTTC AAGATCGAGT CGCACAACCA CCCCAGCTTC GTCGAGCCGT ACCAGGGGGC CGCGACGGGT GTAGGCGGCA TCGTCCGTGA CATCCTGACC ATGGGGGCCC GCCCGATCGG CGTGCTCGAC CCGCTGCGCT TCGGCGAGGC CGACGCGGCG GACACCGCCC GGGTCCTGCC CGGGGTCGTC GCCGGCATCG GTGGCTACGG CAACTGCCTC GGCCTGCCCA CCATCGGCGG CGAGGTCGTC TTCGACCCGA CCTACGCGGG TAACCCGCTG GTCAACGCCC TGTGCGTCGG GGTCATGCCG GTCGATCGGG TGCAGACGTC GGCGGCGACC GGGGTCGGCA ACGCCGTCGT CCTGCTCGGC GCCAAGACCG GCCGGGACGG CATCGGCGGC GTCTCGATAC TGGCGTCGGC AACCTTCGAC GAGGGCGGCG GCCCGGCCCG GCGACCCTCG GTGCAGGTCG GCGACCCGTT CACCGAGAAG ATCCTGATCG AGACCTGCCT GGAGCTGTTC GACCGCAAGC TCGTCACCGG CATCCAGGAT CTCGGCGGCG CCGGGCTGAC CTGCGCGCTG ACCGAGACCA CCGCCGCGGG CATCGCCACC GGCCAGCCCG GCGGCATGGA GGTCGACCTC GACCTCGTGC CCCTGCGCGA GGCGTCGATG GCGGCGCACG AGGTCCTCGC GAGCGAGTCC CAGGAGCGCA TGCTGGCGAT CGTCACGCCC GAGGCGCTGC CCGAGGTTCT CGCCCTCGCC GAGCGCTGGG GTGTGCTCGC GACCAGGATC GGCACCGTCA CCAACAGCGG TCGGCTGACC GTACGCTGGC ACGGCGAGGT CGTCGTCGAC GTTCCGCCCG GATCACTCGC CGACGATGGC CCGGTCTACG AGCGCCCCCT GCGCCGCCCG GTCGACTTCG ACCTGGTCCG GGCGGACGCA CCCACGCCCG CCCGGCTCGC CCGGCCACGG ACCGGGCCGG AGCTGCGGGA GACCCTGCTG CGGCTGGTCG CCTCCCCGAA CCTGTGCTCG CGGGCCTGGG TGACCGACCA GTACGACCGG TACGTGCAGG CGGGCACCGT GCTCGCCCAG CCGGAAGATG CGGGCGTGCT TCGGCTGTCG GCGGCCACCG GCCTGGGGAT CGCGCTCGCC ACCGACGGCA ACGGACGGTA CGCACGGCTC GACCCGTTCG CCGGCACCCA GCTCGCCCTG GCGGAGGCGT GCCGCAACGT GGCCGCCGCC GGATCGGTGC CGATCGCGGT GACGAACTGC CTGAACTTCG GCTCCCCAGA GGACCCCGAG GTGATGTGGC AGTTCGCCCA GGCGTGCGCG GGCCTCGCCG AGGGCTGCCG GCGGCTCGGC CTCCCGGTGA CGGGCGGCAA CGTCTCGTTC TACAACCAGA CCGGCTCGAC GCCGATCCAT CCGACCCCGG TGATCGGGGT GCTCGGCCTG TTCGACGACG TCACGCGCCG GACGCCCATC GGCTTCGCCG AGGAGGGGGA CGTCCTGATC CTGCTCGGCG AGACCGCCGA CGAATTCGGC GGCTCGGAGT GGGCGTGGGT GACGCATCGC CATCTCGGCG GCGAGCCGCC GGCCGTCGAC TTCGCCCGGG AGAAGCTACT CGGCGAGATC CTCGTCGCCG GTTCCCGCGA CGGCATGCTC ACCGCCGCGC ACGACCTCTC CGACGGTGGG CTCGCCCAGG CGCTCGTCGA GTCGTGCCTG CGCGGCGGGC ACGGCGCCCG GATCATCCTG CCGGCCGGAT CGGACCCGTT CGTCGAGCTG TTCAGCGAGT CGGCCGGCCG CGCCGTCGTC GCGGTGCCCC GCGCGGAGGA ACTGCGCTTC ACCGACATGT GCGAGGTGCG GGGCCTGCCG TGGCGGCGTG TCGGTGTCGT CGACGGGGAC ACCCTCGACG TACAGGACGC CTTCACCGTC GGCCTCGACG AGCTGCGCGC GGCGCACGAG GGAACGCTGC CGGCACTGTT CGGCCGGCTC ACCTAG
|
Protein sequence | MTGNPAAPAA TSVSPPAEQP YQELGLTDDE YARIIATLGR RPSDAELAMY SVMWSEHCSY KSSKVHLRQF RDTPLTDRLL VGMGENAGVV DVGEGLAVTF KIESHNHPSF VEPYQGAATG VGGIVRDILT MGARPIGVLD PLRFGEADAA DTARVLPGVV AGIGGYGNCL GLPTIGGEVV FDPTYAGNPL VNALCVGVMP VDRVQTSAAT GVGNAVVLLG AKTGRDGIGG VSILASATFD EGGGPARRPS VQVGDPFTEK ILIETCLELF DRKLVTGIQD LGGAGLTCAL TETTAAGIAT GQPGGMEVDL DLVPLREASM AAHEVLASES QERMLAIVTP EALPEVLALA ERWGVLATRI GTVTNSGRLT VRWHGEVVVD VPPGSLADDG PVYERPLRRP VDFDLVRADA PTPARLARPR TGPELRETLL RLVASPNLCS RAWVTDQYDR YVQAGTVLAQ PEDAGVLRLS AATGLGIALA TDGNGRYARL DPFAGTQLAL AEACRNVAAA GSVPIAVTNC LNFGSPEDPE VMWQFAQACA GLAEGCRRLG LPVTGGNVSF YNQTGSTPIH PTPVIGVLGL FDDVTRRTPI GFAEEGDVLI LLGETADEFG GSEWAWVTHR HLGGEPPAVD FAREKLLGEI LVAGSRDGML TAAHDLSDGG LAQALVESCL RGGHGARIIL PAGSDPFVEL FSESAGRAVV AVPRAEELRF TDMCEVRGLP WRRVGVVDGD TLDVQDAFTV GLDELRAAHE GTLPALFGRL T
|
| |