Gene Francci3_4417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4417 
Symbol 
ID3907392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5281320 
End bp5283605 
Gene Length2286 bp 
Protein Length761 aa 
Translation table11 
GC content73% 
IMG OID637881748 
Productphosphoribosylformylglycinamidine synthase II 
Protein accessionYP_483492 
Protein GI86743092 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01736] phosphoribosylformylglycinamidine synthase II 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.39231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCA ACCCCGCCGC CCCCGCGGCC ACCTCCGTGA GTCCCCCCGC CGAGCAGCCC 
TACCAGGAGC TGGGGCTCAC CGACGACGAG TACGCCCGGA TCATCGCGAC CCTCGGTCGC
CGGCCCAGCG ACGCCGAACT CGCGATGTAC TCGGTGATGT GGAGCGAGCA CTGCTCCTAC
AAGTCCTCCA AGGTGCATCT GCGGCAGTTC CGGGACACCC CGTTGACGGA CCGGCTGCTG
GTGGGCATGG GGGAGAACGC GGGCGTCGTC GACGTCGGCG AGGGGCTGGC GGTCACCTTC
AAGATCGAGT CGCACAACCA CCCCAGCTTC GTCGAGCCGT ACCAGGGGGC CGCGACGGGT
GTAGGCGGCA TCGTCCGTGA CATCCTGACC ATGGGGGCCC GCCCGATCGG CGTGCTCGAC
CCGCTGCGCT TCGGCGAGGC CGACGCGGCG GACACCGCCC GGGTCCTGCC CGGGGTCGTC
GCCGGCATCG GTGGCTACGG CAACTGCCTC GGCCTGCCCA CCATCGGCGG CGAGGTCGTC
TTCGACCCGA CCTACGCGGG TAACCCGCTG GTCAACGCCC TGTGCGTCGG GGTCATGCCG
GTCGATCGGG TGCAGACGTC GGCGGCGACC GGGGTCGGCA ACGCCGTCGT CCTGCTCGGC
GCCAAGACCG GCCGGGACGG CATCGGCGGC GTCTCGATAC TGGCGTCGGC AACCTTCGAC
GAGGGCGGCG GCCCGGCCCG GCGACCCTCG GTGCAGGTCG GCGACCCGTT CACCGAGAAG
ATCCTGATCG AGACCTGCCT GGAGCTGTTC GACCGCAAGC TCGTCACCGG CATCCAGGAT
CTCGGCGGCG CCGGGCTGAC CTGCGCGCTG ACCGAGACCA CCGCCGCGGG CATCGCCACC
GGCCAGCCCG GCGGCATGGA GGTCGACCTC GACCTCGTGC CCCTGCGCGA GGCGTCGATG
GCGGCGCACG AGGTCCTCGC GAGCGAGTCC CAGGAGCGCA TGCTGGCGAT CGTCACGCCC
GAGGCGCTGC CCGAGGTTCT CGCCCTCGCC GAGCGCTGGG GTGTGCTCGC GACCAGGATC
GGCACCGTCA CCAACAGCGG TCGGCTGACC GTACGCTGGC ACGGCGAGGT CGTCGTCGAC
GTTCCGCCCG GATCACTCGC CGACGATGGC CCGGTCTACG AGCGCCCCCT GCGCCGCCCG
GTCGACTTCG ACCTGGTCCG GGCGGACGCA CCCACGCCCG CCCGGCTCGC CCGGCCACGG
ACCGGGCCGG AGCTGCGGGA GACCCTGCTG CGGCTGGTCG CCTCCCCGAA CCTGTGCTCG
CGGGCCTGGG TGACCGACCA GTACGACCGG TACGTGCAGG CGGGCACCGT GCTCGCCCAG
CCGGAAGATG CGGGCGTGCT TCGGCTGTCG GCGGCCACCG GCCTGGGGAT CGCGCTCGCC
ACCGACGGCA ACGGACGGTA CGCACGGCTC GACCCGTTCG CCGGCACCCA GCTCGCCCTG
GCGGAGGCGT GCCGCAACGT GGCCGCCGCC GGATCGGTGC CGATCGCGGT GACGAACTGC
CTGAACTTCG GCTCCCCAGA GGACCCCGAG GTGATGTGGC AGTTCGCCCA GGCGTGCGCG
GGCCTCGCCG AGGGCTGCCG GCGGCTCGGC CTCCCGGTGA CGGGCGGCAA CGTCTCGTTC
TACAACCAGA CCGGCTCGAC GCCGATCCAT CCGACCCCGG TGATCGGGGT GCTCGGCCTG
TTCGACGACG TCACGCGCCG GACGCCCATC GGCTTCGCCG AGGAGGGGGA CGTCCTGATC
CTGCTCGGCG AGACCGCCGA CGAATTCGGC GGCTCGGAGT GGGCGTGGGT GACGCATCGC
CATCTCGGCG GCGAGCCGCC GGCCGTCGAC TTCGCCCGGG AGAAGCTACT CGGCGAGATC
CTCGTCGCCG GTTCCCGCGA CGGCATGCTC ACCGCCGCGC ACGACCTCTC CGACGGTGGG
CTCGCCCAGG CGCTCGTCGA GTCGTGCCTG CGCGGCGGGC ACGGCGCCCG GATCATCCTG
CCGGCCGGAT CGGACCCGTT CGTCGAGCTG TTCAGCGAGT CGGCCGGCCG CGCCGTCGTC
GCGGTGCCCC GCGCGGAGGA ACTGCGCTTC ACCGACATGT GCGAGGTGCG GGGCCTGCCG
TGGCGGCGTG TCGGTGTCGT CGACGGGGAC ACCCTCGACG TACAGGACGC CTTCACCGTC
GGCCTCGACG AGCTGCGCGC GGCGCACGAG GGAACGCTGC CGGCACTGTT CGGCCGGCTC
ACCTAG
 
Protein sequence
MTGNPAAPAA TSVSPPAEQP YQELGLTDDE YARIIATLGR RPSDAELAMY SVMWSEHCSY 
KSSKVHLRQF RDTPLTDRLL VGMGENAGVV DVGEGLAVTF KIESHNHPSF VEPYQGAATG
VGGIVRDILT MGARPIGVLD PLRFGEADAA DTARVLPGVV AGIGGYGNCL GLPTIGGEVV
FDPTYAGNPL VNALCVGVMP VDRVQTSAAT GVGNAVVLLG AKTGRDGIGG VSILASATFD
EGGGPARRPS VQVGDPFTEK ILIETCLELF DRKLVTGIQD LGGAGLTCAL TETTAAGIAT
GQPGGMEVDL DLVPLREASM AAHEVLASES QERMLAIVTP EALPEVLALA ERWGVLATRI
GTVTNSGRLT VRWHGEVVVD VPPGSLADDG PVYERPLRRP VDFDLVRADA PTPARLARPR
TGPELRETLL RLVASPNLCS RAWVTDQYDR YVQAGTVLAQ PEDAGVLRLS AATGLGIALA
TDGNGRYARL DPFAGTQLAL AEACRNVAAA GSVPIAVTNC LNFGSPEDPE VMWQFAQACA
GLAEGCRRLG LPVTGGNVSF YNQTGSTPIH PTPVIGVLGL FDDVTRRTPI GFAEEGDVLI
LLGETADEFG GSEWAWVTHR HLGGEPPAVD FAREKLLGEI LVAGSRDGML TAAHDLSDGG
LAQALVESCL RGGHGARIIL PAGSDPFVEL FSESAGRAVV AVPRAEELRF TDMCEVRGLP
WRRVGVVDGD TLDVQDAFTV GLDELRAAHE GTLPALFGRL T