Gene Francci3_4416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4416 
Symbol 
ID3907391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5280528 
End bp5281241 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content69% 
IMG OID637881747 
Productphosphoribosylformylglycinamidine synthase I 
Protein accessionYP_483491 
Protein GI86743091 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0047] Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain 
TIGRFAM ID[TIGR01737] phosphoribosylformylglycinamidine synthase I 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0751085 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTGG TAATGACTGA GGCGGACTCG CCGGCCCGGA TCGGGATCGT CACCTTCCCC 
GGCTCCCTCG ATGACCAGGA CACGGCGCTC GCGGTGCGGG CCGCCGGTGC CGAACCGGTC
TCCCTCTGGC ATGGCGACAG CGATCTCGCC GGCGTTGACG CCGTCATCCT GCCCGGCGGA
TTCTCCTACG GTGACTACCT GCGTGCCGGT GCGATAGCCC GGTTCTCGCC CATGGTGGCG
GCCCTCGTCC CGGCGGCCCG CGCGGGCCTG CCGATTCTCG GCATCTGCAA CGGGTTTCAG
GTGCTCTGCG AGGCCGGCCT GCTCCCCGGG GCACTGACCC GCAACGTGGG ACTGCACTTC
GTCTGCCGCG ACCAGCGGTT GCGGGTCGAG GCGCCGGGCA CTGCCTGGAC CCGCGGCTAC
CAGGACGGCG AGGAGATCGT CATCCCGGTG AAGCACGGGG ATGGCCGCTA TGTTGCGGCC
CCGGACGTGC TCGCCGAACT CGAGGCGGCC GGGCGGGTTG TGGTGCGCTA CGTCGGCGGG
AATCCCAACG GGTCGGCGGC CGACATCGCC GGGATCTGTA ACGAGAGCCG GACGATCGTG
GGCCTGATGC CGCATCCCGA GCATGCTGTC GACGACCTCA CCGGCCCCGG GGTCGACGGG
CTTCGCATGT TCACCTCGGT GCTGTCCGGC TTTTTGTCGG CTTTTTCCTC TTAA
 
Protein sequence
MGVVMTEADS PARIGIVTFP GSLDDQDTAL AVRAAGAEPV SLWHGDSDLA GVDAVILPGG 
FSYGDYLRAG AIARFSPMVA ALVPAARAGL PILGICNGFQ VLCEAGLLPG ALTRNVGLHF
VCRDQRLRVE APGTAWTRGY QDGEEIVIPV KHGDGRYVAA PDVLAELEAA GRVVVRYVGG
NPNGSAADIA GICNESRTIV GLMPHPEHAV DDLTGPGVDG LRMFTSVLSG FLSAFSS