Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4414 |
Symbol | |
ID | 3907389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5278629 |
End bp | 5279774 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637881745 |
Product | NAD/FAD-dependent oxidoreductase-like |
Protein accession | YP_483489 |
Protein GI | 86743089 |
COG category | [R] General function prediction only |
COG ID | [COG3380] Predicted NAD/FAD-dependent oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0288059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACGA TGAACACAGC CGTTCGGCGG ACGGGCACTG GCGGGACTGA TGGCGAGCAT CATCAACGCT CGTCCGCAAG CCACCGTCAC CGTGGCGACA CATCCAGGAG GGCGACGCCG CGGGAACCGG TGAAAGGCCA ATCGGCATGC GGCGCCCGCG GCATTCATCT CGATATAGGG GGATCGGTGG CGAAGGTCGT CGTCGCCGGC GGGGGCATTG CTGGGATCGC CTGCGCCAGC GCACTGCTAG CCGAGGGAAT CACCGTGGAT GTCCGTGACC GGGGCCGCGT GATCGGCGGA CGGATGGCCT CACGGTGGAT AGACGGGCGC ATCGTGGACT CCGGCGCGTC GTACTTCACC GCCACCTCGC CGGAGTTCCG CGAAGTCGTG GACGATTGGT TCATCCGTGG CCTGGTACGC CCCTGGACGC ACCGAATGTC GGTAATCAGT GGGCCGACCG CCACCCTGGC CGAGCCGCGT TCCGGCCCGC TGCGGTACGC CGCCCCGCGC GGGCTGCGTT CCCTGGTCGC CGACCTCGCC TCCCGAGCCG GGGTGCAGGT CACGCAGTCC ACACCGATCC GCCGGGTCAC CCCGGGTCCC CGCGTTGACG ACGAGGCCGC CGACGCGGTG GTCCTCGCGA TGCCCGACCC GCAGGCGCTG CGCCATCTCG ACCCGGCCTG CACCGAGGAG CGGGCGCAGC TCGCCGGCCG ACCCTGGTCG CCGGTGCTGG CGCTGCTCGC CGGCTGGCCC TACCGGTGCT GGGCACCGAT CGACGGAGCC TTCGTCCACG ACGACGATAC GATTGCCTGG ATCGCCGACG ACGGTCGTCG CCGGGGTGAC AATGCCGCCG TCCTGGTCGC CCACTCGACG CCGGATTTCG CGCGGCCGCG GCTGGCCGAC CCCGCGGCGG CCGGGCCCGA TCTCGTCGCG GCGCTACGGC GCCTGCTCAC CATCACGATG CAACCCAGTT GGACGTATGT GCAAAAGTGG ACCTTCGCTC GCCCGGACCG TCCGCACGAA CAGCCGTACT ACCTGTCCAG CAGTGGGATC GGGCTCGCCG GCGACGGCTG GGGAACACCG AAGATCGAGA GTGCCTGGCG CTCGGGCACC GAGCTGGGCC GGGCCCTTGC CGCCCGATTG AGATAA
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Protein sequence | MGTMNTAVRR TGTGGTDGEH HQRSSASHRH RGDTSRRATP REPVKGQSAC GARGIHLDIG GSVAKVVVAG GGIAGIACAS ALLAEGITVD VRDRGRVIGG RMASRWIDGR IVDSGASYFT ATSPEFREVV DDWFIRGLVR PWTHRMSVIS GPTATLAEPR SGPLRYAAPR GLRSLVADLA SRAGVQVTQS TPIRRVTPGP RVDDEAADAV VLAMPDPQAL RHLDPACTEE RAQLAGRPWS PVLALLAGWP YRCWAPIDGA FVHDDDTIAW IADDGRRRGD NAAVLVAHST PDFARPRLAD PAAAGPDLVA ALRRLLTITM QPSWTYVQKW TFARPDRPHE QPYYLSSSGI GLAGDGWGTP KIESAWRSGT ELGRALAARL R
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