Gene Francci3_4414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4414 
Symbol 
ID3907389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5278629 
End bp5279774 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content71% 
IMG OID637881745 
ProductNAD/FAD-dependent oxidoreductase-like 
Protein accessionYP_483489 
Protein GI86743089 
COG category[R] General function prediction only 
COG ID[COG3380] Predicted NAD/FAD-dependent oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0288059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACGA TGAACACAGC CGTTCGGCGG ACGGGCACTG GCGGGACTGA TGGCGAGCAT 
CATCAACGCT CGTCCGCAAG CCACCGTCAC CGTGGCGACA CATCCAGGAG GGCGACGCCG
CGGGAACCGG TGAAAGGCCA ATCGGCATGC GGCGCCCGCG GCATTCATCT CGATATAGGG
GGATCGGTGG CGAAGGTCGT CGTCGCCGGC GGGGGCATTG CTGGGATCGC CTGCGCCAGC
GCACTGCTAG CCGAGGGAAT CACCGTGGAT GTCCGTGACC GGGGCCGCGT GATCGGCGGA
CGGATGGCCT CACGGTGGAT AGACGGGCGC ATCGTGGACT CCGGCGCGTC GTACTTCACC
GCCACCTCGC CGGAGTTCCG CGAAGTCGTG GACGATTGGT TCATCCGTGG CCTGGTACGC
CCCTGGACGC ACCGAATGTC GGTAATCAGT GGGCCGACCG CCACCCTGGC CGAGCCGCGT
TCCGGCCCGC TGCGGTACGC CGCCCCGCGC GGGCTGCGTT CCCTGGTCGC CGACCTCGCC
TCCCGAGCCG GGGTGCAGGT CACGCAGTCC ACACCGATCC GCCGGGTCAC CCCGGGTCCC
CGCGTTGACG ACGAGGCCGC CGACGCGGTG GTCCTCGCGA TGCCCGACCC GCAGGCGCTG
CGCCATCTCG ACCCGGCCTG CACCGAGGAG CGGGCGCAGC TCGCCGGCCG ACCCTGGTCG
CCGGTGCTGG CGCTGCTCGC CGGCTGGCCC TACCGGTGCT GGGCACCGAT CGACGGAGCC
TTCGTCCACG ACGACGATAC GATTGCCTGG ATCGCCGACG ACGGTCGTCG CCGGGGTGAC
AATGCCGCCG TCCTGGTCGC CCACTCGACG CCGGATTTCG CGCGGCCGCG GCTGGCCGAC
CCCGCGGCGG CCGGGCCCGA TCTCGTCGCG GCGCTACGGC GCCTGCTCAC CATCACGATG
CAACCCAGTT GGACGTATGT GCAAAAGTGG ACCTTCGCTC GCCCGGACCG TCCGCACGAA
CAGCCGTACT ACCTGTCCAG CAGTGGGATC GGGCTCGCCG GCGACGGCTG GGGAACACCG
AAGATCGAGA GTGCCTGGCG CTCGGGCACC GAGCTGGGCC GGGCCCTTGC CGCCCGATTG
AGATAA
 
Protein sequence
MGTMNTAVRR TGTGGTDGEH HQRSSASHRH RGDTSRRATP REPVKGQSAC GARGIHLDIG 
GSVAKVVVAG GGIAGIACAS ALLAEGITVD VRDRGRVIGG RMASRWIDGR IVDSGASYFT
ATSPEFREVV DDWFIRGLVR PWTHRMSVIS GPTATLAEPR SGPLRYAAPR GLRSLVADLA
SRAGVQVTQS TPIRRVTPGP RVDDEAADAV VLAMPDPQAL RHLDPACTEE RAQLAGRPWS
PVLALLAGWP YRCWAPIDGA FVHDDDTIAW IADDGRRRGD NAAVLVAHST PDFARPRLAD
PAAAGPDLVA ALRRLLTITM QPSWTYVQKW TFARPDRPHE QPYYLSSSGI GLAGDGWGTP
KIESAWRSGT ELGRALAARL R