Gene Francci3_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4407 
Symbol 
ID3907382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5268020 
End bp5268955 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content75% 
IMG OID637881738 
Productdihydropteroate synthase 
Protein accessionYP_483482 
Protein GI86743082 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0294] Dihydropteroate synthase and related enzymes 
TIGRFAM ID[TIGR01496] dihydropteroate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.523911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGA CCGTCGAGGA ACTCCTCCTG CCGGGCGGCC TGACCAGGGT GATGGGCGTC 
GTCAACGTCA CGCCGGACTC GTTCTCGGAC GGCGGTACCT ACCTCGATCC GCTGGACGCG
GTCCGGGCCG GGCTGCGGAT GGCCGACGAC GGGGCGGATC TCGTCGACGT CGGTGGTGAG
TCGACCCGAC CGGGCGCGTC TCGGGTCATC GCCGCCGAGG AGATGCGTCG CGTGCTTCCG
GTGGTGGCCG AGCTCGCCGC CGCGGGCGTC CGGGTCAGCG TCGACACCAG CCGTGCCGCT
GTGGCCGCCG CCGCGGTCGA CGCCGGGGCG GTGCTCGTCA ACGACGTGTC CGGCGGCGCC
GATCCCGATC TGCTCGGTCT CGTCGCCGAC CGTGGCGTGC ACTACGTGCT GATGCATGGG
CGGGGGACCA GTGCGGACAT GGCGTCCCGG GCGGTGTACC GCGACGTGGT CGCGGAGGTG
GTCGCGGAGC TCGTGGACCG GCTCGGGGCC GTGCTGGCCG CCGGGATCGC CGAGGATCGG
GTCATCCTCG ACCCCGGCAT CGGCTTCGCC AAGACCGCCC GGCACAACTG GACGCTTCTG
CGCCACATCG ACGCCTTCGT CGCGCTCGGC CGGCCGCTGC TCGTCGGCAC GTCCCGCAAG
TCGTTTCTCG GCTCGGTACT GGCGGACGCG AACGGCCCGG CCCGGCCGGT CGCCGACCGG
GACGACGCCA CCCAGGCGAC CACCGCGTTG CTGGCCGCGG CCGGGGTGTG GGGCGTGCGG
GTGCACGCCG TCCGGCCGGC CGCCGACGCC GTGCGGGTCG TGCGCGCCTG GCGGGACGAT
AGTGACCGGC GCGGGGACGG ACCCGAGGCC GATCCCGGCC GGGCCGTGGA TCCCGGCCGC
GTGGAAGATC GGGAGGTTCC GTGGGCTCCG CGGTGA
 
Protein sequence
MSGTVEELLL PGGLTRVMGV VNVTPDSFSD GGTYLDPLDA VRAGLRMADD GADLVDVGGE 
STRPGASRVI AAEEMRRVLP VVAELAAAGV RVSVDTSRAA VAAAAVDAGA VLVNDVSGGA
DPDLLGLVAD RGVHYVLMHG RGTSADMASR AVYRDVVAEV VAELVDRLGA VLAAGIAEDR
VILDPGIGFA KTARHNWTLL RHIDAFVALG RPLLVGTSRK SFLGSVLADA NGPARPVADR
DDATQATTAL LAAAGVWGVR VHAVRPAADA VRVVRAWRDD SDRRGDGPEA DPGRAVDPGR
VEDREVPWAP R