Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4405 |
Symbol | |
ID | 3907380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5266946 |
End bp | 5267551 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881736 |
Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
Protein accession | YP_483480 |
Protein GI | 86743080 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0878519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGTG ACCGGATGAT GACCCGGCCG GAGCATGCGG TGCTGTCGCT CGGGTCCAAC CTCGGCGATC GTCTGGGCCG GCTGTCCGCC GCCGTCCATC GGCTCGACCG CGCGCTGGGG GTGCTCGCCG GCTCACCGGT GTACGAGACG GCACCCGTCG GTGGACCCGA GCAGGACGAC TACCTGAACG CCGTCGTCCT GGTGCGCCCG GCACCCCCGC GTGATCTGCT CGAGGTCGTC CGCGAGGTGG AGGAACGGGC CGCGCGGGTC CGGGCCGTCC GGTGGGGCCC GCGAACGCTC GACGTCGATG TCATCGCGAT CGGTGACCTG CGCAGTGACG ACCCCGAGAT CCTCGTGCCG CATCCCCGAG CACATCTGCG GGCCTTCGTC TGCGTGCCCT GGCTGGACGT TGATCCCGAG GCGACGCTGC CCGGGCACGG GCGGGTCGCC GATCTGGTCG CCCGGATGGC CGCGGGGAAG CACCCGGCCG GTCTGCGCCG GATCCCGTGG TCGCTGTCGG ATCCCGTGGT CGAGGCGGAT CCGGGGGCCG ATGCCGTCAC CGATCCCGCC GTCGGCGGCA GTGACGCCGA AGAGGCGGCC AGGTGA
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Protein sequence | MAGDRMMTRP EHAVLSLGSN LGDRLGRLSA AVHRLDRALG VLAGSPVYET APVGGPEQDD YLNAVVLVRP APPRDLLEVV REVEERAARV RAVRWGPRTL DVDVIAIGDL RSDDPEILVP HPRAHLRAFV CVPWLDVDPE ATLPGHGRVA DLVARMAAGK HPAGLRRIPW SLSDPVVEAD PGADAVTDPA VGGSDAEEAA R
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