| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4400 |
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| Symbol | |
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| ID | 3907375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 5259593 |
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| End bp | 5261230 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881731 |
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| Product | helicase-like |
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| Protein accession | YP_483475 |
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| Protein GI | 86743075 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.116832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGACG GCCCGTTGAT CGTCCAGTCG GACAAGACGT TGCTGCTCGA GGTCGAGCAT
CCCAGTGCTG TCGAGGCGCG GTCGGCCATC GCTCCGTTCG CCGAGCTCGA ACGGTCTCCG
GAGCACGTGC ACACCTATCG GGTGACGCCG CTGGCGCTGT GGAACGCCCG GGCCGCCGGT
CATGACGCCG AGCAGGTTGT CGATGCGCTG GTTCGCTTCT CCCGTTACGC CGTGCCGCAC
GCCCTGCTCG TCGACATCGC CGACACGATG GATCGCTACG GTCGGCTGCG CCTGGAAAAT
GACCCGGCCC ACGGGTTGGT GTTGCGTGCT CTCGACCGGG TGGTGCTCGT CGAGGTGGCC
CGGGCCAAGA AGGTCGTGCC GATGCTCGGC TCCCGCATCG ACGACGACAC GATCGCCGTG
CACCCCTCCG AGCGCGGCCG GCTCAAGCAG GTGCTGCTCA AACTCGGGTG GCCGGCGGAG
GATCTCGCCG GCTACGTCGA CGGCGAGGCG CACCGGATCG ACCTGCGCCA GGACGGCTGG
GAGCTGCGCG ACTACCAGAA GGGCGCGGTA GCCGGGTTCT GGGAGGGCGG GTCGGGGGTC
GTCGTGCTGC CTGCGGGCGC CGGGAAGACC ATCGTCGGCG CCGCGGCCAT GGCCCAGGCC
GGGGCGACCA CGCTGATCCT GGTTACGAAC ACGGTCGCCG GCCGGCAGTG GCGGCACGAG
CTGCTGCGCC GCACCTCGCT GACCGAGGAG GAGATCGGCG AGTACTCCGG GGAGCGCAAG
GAGATCCGGC CGGTCACCAT CGCCACCTAC CAGGTGATGA CGGCCCGGCG TAAGGGCGAA
TACCTGCACC TGGAGTTGTT CGGGGCCCGG GACTGGGGTC TGATCGTCTA CGACGAGGTG
CATCTGCTCC CGGCGCCGGT CTTCCGGATG ACCGCCGACA TCCAGTCCCG TCGTCGGCTC
GGCCTGACCG CGACCCTCGT CCGGGAGGAC GGCCGGGAGG GCGACGTCTT CTCGTTGATC
GGGCCGAAGC GGTATGACGC CCCGTGGCGG GAGATCGAGG CACAGGGCTG GATCGCGCCG
GCGCAGTGCA CCGAGGTGCG CGTCACGCTC ACCGAGGACG AGCGGATGGC CTACGCCGTC
GCCGAGCCGG AGGAGCGGTA CCGGATGTGT GCCACCGCCC GCAGCAAGCG GGCGGTGGTG
GAGCGTCTCG TCCGCCAGCA CTCCGATGAC CGGGTGCTGG TGATCGGCGC GTATCTCGAC
CAGCTCGACG AGCTCGGGGA ACTGTTGGAC GCCCCGGTCA TCCAGGGTTC CACCCGTAAC
CGGGAGCGGG AGCGACTGTT CGAGGCGTTC CGGACCGGGG AGATCACCAC ACTGGTCGTT
TCCAAGGTCG CGAATGTCTC CATCGACCTG CCGGAGGCCG GGGTGGCCGT GCAGGTCTCG
GGCACGTTCG GTTCCCGCCA GGAGGAGGCC CAGCGGCTCG GTCGGGTGCT GCGGCCCAAG
GCCGACGGCC GCACGGCGCA CTTCTACACG GTGGTGGCCC GCGACACCCT TGACCAGGAG
TACGCGGCGC ACCGCCAGCG ATTCCTCGCC GAGCAGGGCT ACGCCTACAC CATCGTCGAC
GCCGACGACG TCTGCTAG
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| Protein sequence | MTDGPLIVQS DKTLLLEVEH PSAVEARSAI APFAELERSP EHVHTYRVTP LALWNARAAG
HDAEQVVDAL VRFSRYAVPH ALLVDIADTM DRYGRLRLEN DPAHGLVLRA LDRVVLVEVA
RAKKVVPMLG SRIDDDTIAV HPSERGRLKQ VLLKLGWPAE DLAGYVDGEA HRIDLRQDGW
ELRDYQKGAV AGFWEGGSGV VVLPAGAGKT IVGAAAMAQA GATTLILVTN TVAGRQWRHE
LLRRTSLTEE EIGEYSGERK EIRPVTIATY QVMTARRKGE YLHLELFGAR DWGLIVYDEV
HLLPAPVFRM TADIQSRRRL GLTATLVRED GREGDVFSLI GPKRYDAPWR EIEAQGWIAP
AQCTEVRVTL TEDERMAYAV AEPEERYRMC ATARSKRAVV ERLVRQHSDD RVLVIGAYLD
QLDELGELLD APVIQGSTRN RERERLFEAF RTGEITTLVV SKVANVSIDL PEAGVAVQVS
GTFGSRQEEA QRLGRVLRPK ADGRTAHFYT VVARDTLDQE YAAHRQRFLA EQGYAYTIVD
ADDVC
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