Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4384 |
Symbol | |
ID | 3907358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 5234882 |
End bp | 5236642 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637881715 |
Product | metallophosphoesterase |
Protein accession | YP_483459 |
Protein GI | 86743059 |
COG category | [R] General function prediction only |
COG ID | [COG1409] Predicted phosphohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.508778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.535785 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGAG TAGCCCCGCG GCTGCTCCGG CCATCGCAGT CTCGGCCGCG TAGCCGGGCT GGTCGCTCCA GAGCTGGAAC ACGTTCGTTC TCTCACACAT CGCTCGGTCG CACCGCTCGA TCGGCGACCG GTAACAGAAT ATGGGAAAAT GTCAGCCACC GGGTAACCAC CTTGCCGGCC GGGGCATCCG GCGAGATCGG GTCCGGTTGC CGGCGCAGGC ACGAGCACAG GCACAACTTC ATCGCCCCGA GGACGATTCG GACTGCTGGT TCGGCGAACG GGAGAGCTCC GCTGGTGACT GGTAGTCCCG ACGTCGCGCT CGGCGTTCAC CTGACCTTCG GCTCCGATCC CGCCACGTCC ATGGTCGTCT CGTGGCTGAC CCGAACGGCC GTCCCTCGGC CCCAGGTACG GTTCGGTCCG GCGGCTGGCG GATCTACCGG CTCGGTGACC GCGCTCACCC GTTCCTACAC GGACGCCCTG ACAAACGAGG TGGTCTTCGC CCACCATGCG CACCTGTCCG GGCTCCTGCC GGCTGCCGAC TACCGCTATG ACGTGGGTCA TGACGGGCGC TGGGGCTTGG CCCACGGGTC GTTCCGCACG GCTCCGCGGC ATCGGGCCGC CTTCAGCTTC ACCTGCTTCG GCGACCAGGG CACCGACGAG CCGCACGATC CGTACGGCTC GGCTGCGTCA CGCCACGTGA TAACCGGAGT GGAACGCCTC GCGCCACTGT TCAACCTCGC GAACGGTGAC CTGTCGTACG CCAACCAGCG CACGGATCCG GTTCGCGCCT GGTTCGACTG GTTCGCGATG ATCAGCGCCT CCGCCCGGTT CCGGCCGTGG ATGCCCTGCA ACGGCAACCA TGAGACCGAG CGGGGCAACG GAGCTCTGGG GCTCGCCGCC TACCAGACCT ACTTCGCCCT TCCCCAGCAC GACGAGGAGG CCTACCTCGC CGGGCTCTGG TACGCGTTCA CCGTCGGCGG CGTGCGGTTC GTCATGCTCA GCGCCGCCGA CGTCTGCTAT CAGGACAGCG GGCGGGTCTA CCTCCATGGG TACAGCGCCG GCCGGCAGAC CTCCTGGTTG AGACAGACCC TCAAACAGGC CCGCGCCGAT CCCGGTATCG ACTGGATCGT CGTCGGCATG CACCACGCCG CGGTGTCGAC CGCGGTGGAG CACAACGGCG CCGACCTCGG TATCCGGGAA GAATGGCTGC CGTTGTTCGA CACCTACGAG GTGGATCTGG TGCTCTGCGG CCACGAGCAC CACTACGAGC GCACTCATCC GCTGCGCGGG GTCGTGCCGG ACAGCGCGAC CCGGACTCCC CGCCCGGTCC CCGGCGCGAC GACGCCCGCC CGGAAGACCG CTGACGGAGC GGGCGCCGCG GCCGGTGACG GGGCCGGTGA CCTGCTCGAC ACCTCGGCGG GCACCGTCCA CCTGCTCGTG GGCACCGGAG GATCCTCGTC GCCGTCCGCG CACGCACTGT TCGATCCACC CGCCTGCTGG GTCATCGTCG GCGTGCACGA ACAGGATCCC GGCCGGTGGC ATCGCCAATC GGTCCGGGCG AGAGAGGACG CGCCCTGGCT CGCCTTCCGG GCACCGGAGC ATCCATACGC CTTCGCGGCT TTCGAGGTGG ATCCAGGTGA ACCGGGCGGC TCGACGAGCA TCCGGGTGAC CGTGTACGAC TCCAGTGCAC CGACGCCGGT CCCGTTCGAC CGGTTCACCC TCGTCCGGCC ACGCGCCGAC GCGGCCGTGC CCACCACCTG A
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Protein sequence | MAGVAPRLLR PSQSRPRSRA GRSRAGTRSF SHTSLGRTAR SATGNRIWEN VSHRVTTLPA GASGEIGSGC RRRHEHRHNF IAPRTIRTAG SANGRAPLVT GSPDVALGVH LTFGSDPATS MVVSWLTRTA VPRPQVRFGP AAGGSTGSVT ALTRSYTDAL TNEVVFAHHA HLSGLLPAAD YRYDVGHDGR WGLAHGSFRT APRHRAAFSF TCFGDQGTDE PHDPYGSAAS RHVITGVERL APLFNLANGD LSYANQRTDP VRAWFDWFAM ISASARFRPW MPCNGNHETE RGNGALGLAA YQTYFALPQH DEEAYLAGLW YAFTVGGVRF VMLSAADVCY QDSGRVYLHG YSAGRQTSWL RQTLKQARAD PGIDWIVVGM HHAAVSTAVE HNGADLGIRE EWLPLFDTYE VDLVLCGHEH HYERTHPLRG VVPDSATRTP RPVPGATTPA RKTADGAGAA AGDGAGDLLD TSAGTVHLLV GTGGSSSPSA HALFDPPACW VIVGVHEQDP GRWHRQSVRA REDAPWLAFR APEHPYAFAA FEVDPGEPGG STSIRVTVYD SSAPTPVPFD RFTLVRPRAD AAVPTT
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