Gene Francci3_4380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4380 
Symbol 
ID3907354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5229659 
End bp5230576 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content64% 
IMG OID637881711 
Productputative secreted hydrolase 
Protein accessionYP_483455 
Protein GI86743055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.784206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.181391 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGACC GAATCTCGGG AACACAACCC GGCGTATCGT CACATCCCGG CAGCGGATAC 
TTCACTCATC CCTTTCTTGT CACCGCGATG GCAGCATTCT TGTTCGCCGC GGTTCCGATT
ACATACGGTT GGAATGATCC GGCTTCGGCC GGTCCGCAGC CCCGTACCCT GGCCGTGCTG
GGCGACTCCT ACTCCTCGGG AGAGGGCAAT CCCCCCTTCG ACTCGCTGGC CCCCCGGTGC
CGGCGGAGCA GCCAGGCCTG GCCACGACTA CTGGGCGGTA TGGGATCGGG GGTCACCGTC
TCGCTGTTCG CCGCGTGTTC CGGAGCCACC ACCGGCGCCC TACACGAGTC ATTCAAGGGC
GAGAAACCCC AGCTGGCCCA GCTACGTGCA CTGGGCCGGG CCCCGGACGT CGTCACCATC
ACCATCGGCG GCAACGATGC CGGATTCGGC AGAGTCATCT TCAGTTGTTA TGCGTGGAGA
TGCTTCTGGG ATGGCAACGA CCGCCGCGAG CGCGATCTTG TCACCAAGGA ACTCCCGGGT
GTCCTGAGCG CCAACTACAC GGCGGTGAAG GCCGCCGCCC CGCATTCGCG GATCATCGTG
GTCGGCTATC CCTACATATT TCCGGACAAC CAACTCAACA ACATCTGTAC CTGGCTGACC
AACAGGGAAC GTCGACAGCT GACGAGGCTG AACAGACAGC TCGACCGGGT CATCAGAAAA
GCCGCGTCGG ATGCGGGAGT GGAGTTCGTC TCGACGGATC GGGTGCTACG CGGTCACGAA
ATCTGCACAC CGGACCCGTG GGTGGCTCCG GTCAATCTGT TCGGACCGAC ACGTGATCTG
AGCGCGCACC CCACCATGCA CGGGCAGCAG GCCATCGCCG AGGCCGTCCA GCGCCATCTC
GCCATGGACA GCTGGTGA
 
Protein sequence
MRDRISGTQP GVSSHPGSGY FTHPFLVTAM AAFLFAAVPI TYGWNDPASA GPQPRTLAVL 
GDSYSSGEGN PPFDSLAPRC RRSSQAWPRL LGGMGSGVTV SLFAACSGAT TGALHESFKG
EKPQLAQLRA LGRAPDVVTI TIGGNDAGFG RVIFSCYAWR CFWDGNDRRE RDLVTKELPG
VLSANYTAVK AAAPHSRIIV VGYPYIFPDN QLNNICTWLT NRERRQLTRL NRQLDRVIRK
AASDAGVEFV STDRVLRGHE ICTPDPWVAP VNLFGPTRDL SAHPTMHGQQ AIAEAVQRHL
AMDSW