Gene Francci3_4352 details

Gene Information

• Locus tag: Francci3_4352
• Symbol: dnaK
• ID: 3907324
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Frankia sp. CcI3
• Kingdom: Bacteria
• Replicon accession: NC_007777
• Strand: +
• Start bp: 5197168
• End bp: 5199018
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 637881683
• Product: molecular chaperone DnaK
• Protein accession: YP_483427
• Protein GI: 86743027
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 13
• Fosmid unclonability p-value: 0.971406
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATCGAAA GGCACACAGA CATGGCACGA GCGGTCGGTA TCGACCTCGG CACCACGAAC 
TCCGTCGTGA GCGTGCTCGA GGGCGGCGAA CCCACGGTGA TCGCCAACGC CGAGGGCTCC 
CGGACGACCC CGTCGGTCGT GGCTTTCGCG AAGAACGGCG AGGTCCTGGT CGGCGAGGTC 
GCCAAGCGTC AGGCGGTGAC GAACGTCGAG CGCACCATCC GGTCGGTCAA ACGCCACATG 
GGCACCGACT GGAAGATGAA GGTCGACGCG AAGGATCTCA CGCCCCAGGA GATCAGCGCG 
TTCATCCTGC AGAAGCTGAA GCGGGACGCC GAGTCCTACC TCGGTGAGAC GGTTACGGAC 
GCGGTCATCA CCGTCCCGGC GTACTTCGAC GACGCCCAGC GTCAGGCCAC CACCGAGGCG 
GGCACGATCG CCGGGCTCAA CGTCCTGCGG ATTGTCAACG AGCCGACCGC CGCGGCCCTC 
GCCTACGGGT TGGACAAGGG CGAGAAGGAG CAGACCATCC TGGTCTTCGA CCTCGGTGGC 
GGCACCTTCG ACGTCTCCCT GCTGGAGATC GGCGACGGTG TCGTCGAGGT GAAGTCCACC 
TCCGGTGACA CCCACCTCGG TGGTGACGAC TGGGATCAGC GCATCACCGA CCACCTGATC 
AAGACCTTCA ACGGCCAGCA CGGGGTCGAC CTCGGCAAGG ACAAGATGGC CCTGCAGCGG 
CTGCGGGAGG CCGCCGAGAA GGCGAAGATC GAGCTTTCGC AGTCCACCCA GACCGCGATC 
AACCTGCCCT ACATCACCGC GTCGGCCGAG GGTCCCCTGC ACCTCGACGT CTCGCTGTCG 
CGCGCCGAGT TCCAGCGGAT GACCTCCGAC CTCATCGACC GCTGCAGGCA CCCCTTCCAG 
CAGGCGGTGA AGGACGCGGG GATCAAGGTC AGCGACATTG ACCACGTCGT CCTCGTCGGT 
GGTTCCACCC GGATGCCCGC CGTCGTCGAG CTGGTCCGCG AGCTGACCGG GGGCAAGGAG 
CCGAACAAGG GCGTCAACCC GGACGAGGTC GTCGCCGTCG GCGCCTCGCT GCAGGCCGGC 
GTGCTCAAGG GCGAAGTCAA GGACGTCCTG CTCCTCGACG TCACCCCGCT CTCGCTCGGC 
ATCGAGACGA AGGGGGGGAT CATGACCAAG CTCATCGAGC GCAACACCAC GATCCCCACC 
AAGCGCTCGG AGATCTTCAC CACCGCCGAG GACAGCCAGC CCTCCGTGCA GATCCAGGTC 
TTCCAGGGCG AGCGCGAGAT GGCCGCCTAC AACAAGAAGC TCGGCATGTT CGAGCTGACC 
GGCCTGCCGC CCGCCCCGCG GGGCATGCCC CAGATCGAGG TCACCTTCGA CATCGACGCG 
AACGGCATCG TGCACGTGTC CGCGAAGGAC CTGGGCACCG GCAAGGAGCA GTCGATGACC 
ATCACCGGCG GCTCGGCGCT GCCGAAGGAC GACATCGACC GCATGGTCCG CGACGCCGAG 
CAGTACGCCG AGGAGGACCG CAGGCGCCGG GAGGAGGCCG AGACCCGCAA CAAGGCCGAG 
ACGCTCGTCT ACTCGACCGA GCGGTTCCTC GCCGAGAACG GCGAAAAGAT CGACGCCGCG 
GTGAAGAGCG ACGTGGAGGA GAAGCTCGGC ACGCTGCGGG GCGCCGTCGC CGGCACCGAC 
ACGGCGGCGA TCCGCGAGGC GGCCGACGCG CTGGCCGCGG CGAGCCAGGC GATGGGCCAG 
GCCATGTACG CGCAGGCCGC CCAGGAGGGC GCGGGTGCCT CCGGCGGCGC CGGAGCAGCC 
GACGACGACG TGGTCGACGC GGAGATCGTG GATGAGGAGG ACAAGAAGTG A 

 

Protein sequence

MIERHTDMAR AVGIDLGTTN SVVSVLEGGE PTVIANAEGS RTTPSVVAFA KNGEVLVGEV 
AKRQAVTNVE RTIRSVKRHM GTDWKMKVDA KDLTPQEISA FILQKLKRDA ESYLGETVTD 
AVITVPAYFD DAQRQATTEA GTIAGLNVLR IVNEPTAAAL AYGLDKGEKE QTILVFDLGG 
GTFDVSLLEI GDGVVEVKST SGDTHLGGDD WDQRITDHLI KTFNGQHGVD LGKDKMALQR 
LREAAEKAKI ELSQSTQTAI NLPYITASAE GPLHLDVSLS RAEFQRMTSD LIDRCRHPFQ 
QAVKDAGIKV SDIDHVVLVG GSTRMPAVVE LVRELTGGKE PNKGVNPDEV VAVGASLQAG 
VLKGEVKDVL LLDVTPLSLG IETKGGIMTK LIERNTTIPT KRSEIFTTAE DSQPSVQIQV 
FQGEREMAAY NKKLGMFELT GLPPAPRGMP QIEVTFDIDA NGIVHVSAKD LGTGKEQSMT 
ITGGSALPKD DIDRMVRDAE QYAEEDRRRR EEAETRNKAE TLVYSTERFL AENGEKIDAA 
VKSDVEEKLG TLRGAVAGTD TAAIREAADA LAAASQAMGQ AMYAQAAQEG AGASGGAGAA 
DDDVVDAEIV DEEDKK