Gene Francci3_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4348 
Symbol 
ID3907320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5191143 
End bp5191904 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content70% 
IMG OID637881679 
ProductBeta-phosphoglucomutase hydrolase 
Protein accessionYP_483423 
Protein GI86743023 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02009] beta-phosphoglucomutase family hydrolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0954836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGGC TACCCGATCA CATCGAGGCA TGTCTGTTCG ACCTGGATGG CGTGCTGACG 
AACACCGCGA CGATCCACGC GGCCGCGTGG AAAGAGACGT TCGACGATTT CCTGGAGAAC
TGGGCCAAGC GGTCGGGAGA GCCGTTCGTC CCCTTCGACC TCGAGCATGA CTATGTCGAG
TACGTTGACG GCCGGCCCAG GATCGACGGT GTGCGAGCCT TTCTCGACGC CCGTCACATC
AGGCTTCCCG ACGGAACACC GGACGACCCG CCGTCCGCGC TCACCGTGCA TGGGCTGTCC
AACCGGAAGA ACTTCCTCCT GCTGGAACGG ATTCGGAGGG ACAGCGTGGA CATCTATCCC
GGCTCGGTGA CGTATCTGCG GGAACTGGCC ACGCGGGGGA TCCCCCGCGT GGTCGTCTCC
TCCAGCGCCA ACTGCGCCGA GGTGTTGAAG GCGACTGGGC TTGACGCCCT CGTTGACGGA
GCGGTGGACG GCCTCGTTGC CGCCCGTGAC CACCTCGCCG GAAAGCCCGC GCCCGACACC
TTCCTCGCCG GCGCCCGGCT GCTCGGGGTG CCGCCGCGGC GGGCGGCGGT GTTCGAGGAC
GCCCTGGCCG GCGTCGAGGC GGGGCGGGCC GGCGGGTTCG GCTGGGTCGT GGGGATCGAC
CGGGTGGGGC ACGCCGCCGC GTTGCGCGCC CACGGGGCCG ACATCGTGGT GAACGACCTG
GCGGACCTGC TCGGCCACGG CTCCGGGCCC GGCCCCGAAT GA
 
Protein sequence
MLGLPDHIEA CLFDLDGVLT NTATIHAAAW KETFDDFLEN WAKRSGEPFV PFDLEHDYVE 
YVDGRPRIDG VRAFLDARHI RLPDGTPDDP PSALTVHGLS NRKNFLLLER IRRDSVDIYP
GSVTYLRELA TRGIPRVVVS SSANCAEVLK ATGLDALVDG AVDGLVAARD HLAGKPAPDT
FLAGARLLGV PPRRAAVFED ALAGVEAGRA GGFGWVVGID RVGHAAALRA HGADIVVNDL
ADLLGHGSGP GPE