Gene Francci3_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4340 
Symbol 
ID3907311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5181063 
End bp5181824 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID637881670 
Productputative ABC transporter membrane protein 
Protein accessionYP_483415 
Protein GI86743015 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTGC TCACCGTCGA GCGGATCAAG CTGTTCTCGA CCCGCTCACC GTGGTGGTGC 
ATGATCCTGG CGACCGCGCT CACCGTGGGG CTGACCTCGA TCTTCGCGGC GGCGACCAGC
GATAACGACC TCGCCGACCT CACCCCGAAC GTCACCCAGT TCGCCTACAA CTTCGGCCTC
GTGGTGATGA TGGTGATGGC CGCGCTGGCG GTCACCACCG AGTACCGCTT CAGCACGATC
CGGTCCACGT TCCTCGCGGT GCCCACCCGG ACGCCGGCAC TGCTCGCGAA GGCCGTCGTC
GTCGCCCTGC TCGCGGGGAC CGTCGGCGAG CTCACCGCCT TCGCTTCCTG GGGCGTCGCC
AAGCTGATCA GGCCGGATGC CCCCCTGGCC CTGGACACGG CGCAGGAGTA CCGCAACGTC
TTCGGTGTCG GTCTGGTCTA CCTGTTCGCG GCGATCTTTG CCTTGGCTCT GGGTCTGATC
ATCCGGCAGT CGGCGGGCGC GATCGTGATC ATGCTCGTCT ACCTGTTCCT GGCGGAGAGC
CTGTTGCCGG CGATCCCCCG GGTCGGTCGC CACATCCAGC ACTGGCTGCC GTTTGTCAAC
GGCGACAACT TCATCGTCGC CGGGCAGGTG GAGCATTCCG ACGGGCCGCC CGTGGTGAAG
GGGATGCCCT TCGGCCCCTG GGGCTCCCTG GTGTACTTCG CCGCGATCTG CCTCGGCCTG
TTCGCCATCG GGCTCGTCCT GGCCAAGCGT CGGGACGCCT GA
 
Protein sequence
MTLLTVERIK LFSTRSPWWC MILATALTVG LTSIFAAATS DNDLADLTPN VTQFAYNFGL 
VVMMVMAALA VTTEYRFSTI RSTFLAVPTR TPALLAKAVV VALLAGTVGE LTAFASWGVA
KLIRPDAPLA LDTAQEYRNV FGVGLVYLFA AIFALALGLI IRQSAGAIVI MLVYLFLAES
LLPAIPRVGR HIQHWLPFVN GDNFIVAGQV EHSDGPPVVK GMPFGPWGSL VYFAAICLGL
FAIGLVLAKR RDA