Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_4340 |
Symbol | |
ID | 3907311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 5181063 |
End bp | 5181824 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637881670 |
Product | putative ABC transporter membrane protein |
Protein accession | YP_483415 |
Protein GI | 86743015 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGC TCACCGTCGA GCGGATCAAG CTGTTCTCGA CCCGCTCACC GTGGTGGTGC ATGATCCTGG CGACCGCGCT CACCGTGGGG CTGACCTCGA TCTTCGCGGC GGCGACCAGC GATAACGACC TCGCCGACCT CACCCCGAAC GTCACCCAGT TCGCCTACAA CTTCGGCCTC GTGGTGATGA TGGTGATGGC CGCGCTGGCG GTCACCACCG AGTACCGCTT CAGCACGATC CGGTCCACGT TCCTCGCGGT GCCCACCCGG ACGCCGGCAC TGCTCGCGAA GGCCGTCGTC GTCGCCCTGC TCGCGGGGAC CGTCGGCGAG CTCACCGCCT TCGCTTCCTG GGGCGTCGCC AAGCTGATCA GGCCGGATGC CCCCCTGGCC CTGGACACGG CGCAGGAGTA CCGCAACGTC TTCGGTGTCG GTCTGGTCTA CCTGTTCGCG GCGATCTTTG CCTTGGCTCT GGGTCTGATC ATCCGGCAGT CGGCGGGCGC GATCGTGATC ATGCTCGTCT ACCTGTTCCT GGCGGAGAGC CTGTTGCCGG CGATCCCCCG GGTCGGTCGC CACATCCAGC ACTGGCTGCC GTTTGTCAAC GGCGACAACT TCATCGTCGC CGGGCAGGTG GAGCATTCCG ACGGGCCGCC CGTGGTGAAG GGGATGCCCT TCGGCCCCTG GGGCTCCCTG GTGTACTTCG CCGCGATCTG CCTCGGCCTG TTCGCCATCG GGCTCGTCCT GGCCAAGCGT CGGGACGCCT GA
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Protein sequence | MTLLTVERIK LFSTRSPWWC MILATALTVG LTSIFAAATS DNDLADLTPN VTQFAYNFGL VVMMVMAALA VTTEYRFSTI RSTFLAVPTR TPALLAKAVV VALLAGTVGE LTAFASWGVA KLIRPDAPLA LDTAQEYRNV FGVGLVYLFA AIFALALGLI IRQSAGAIVI MLVYLFLAES LLPAIPRVGR HIQHWLPFVN GDNFIVAGQV EHSDGPPVVK GMPFGPWGSL VYFAAICLGL FAIGLVLAKR RDA
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