Gene Francci3_4335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_4335 
Symbol 
ID3907305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp5176762 
End bp5177793 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content63% 
IMG OID637881664 
Producthypothetical protein 
Protein accessionYP_483410 
Protein GI86743010 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.420884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCGA TCCATGATCA CCATCTTTGC CAGGAGACAG GCCGAGACGC GATGAATGGC 
GAGCAGATCC TCACAGTGCA CGAAGCTGCG CGCTCCTGGC AGCCGAACGA GAACGCTGCC
GAAGCCCTGG CGCACACCGT CGAATGGCTC ACCCGCTTCC AGGTCTGCAC GCCCCGGGCC
GAGAGGTACG CCACGCTTTC GGCCTGGGTG TACCCTCTGG CCCCGCTGCC GGAGCTGGAA
CTCGCTTACG ACATCCACGC CTTCTTCCGG ATCTACGACG ACTTCACCGA CGACCTTGCG
GCGGACATCA GCCGCATCAA CGTCATCAGC GCGGAGCTCA CCGGGATTCT CTACGGGAGA
CCCGCGAAGT CCCTCATGGG GATGATCTTC CATGACCTGT GGGCGCGGCA GATCGTCAGC
TCGCCGGACC AGTGGGTGGC TCGGGTCAGC GAGCACTGGG AATGGTACTT CAACACGCAG
GCCACTTACG CGGCGATGCG GGACCGGCGG ATGGACACGA CGGTCGAAGA GTACTTGGAA
CTACGCCTGG GAAACGGCGC GGTGCCGCTG TGCCTGGTGT TCGGCGAGAA GATGAATTTC
ACCTATCTGG CGCCGCACAT CCACCACTGT ACCCAGCTGC GACTGCTGCG CAGGTTAGCC
AGCGACATCA TCGTGTACTG CAACGACGTC TACTCCTCGG TCCGCGACGC GAAGCGCGAC
GACCCGCGCA ATCTGATCTC GATCATCCGA GACCAGGACG GCTGCGATTG GCAGGAGGCA
AGAGCCCGTT GCGAGCAGGA GATGCGGACG CTCGACCAGT CGATACACAC CACAAAGCAG
CGCCTTGACA CGGCCTTCGA CGTGCTGCAT TTCACCGACA CAGAACGCGC CCAGGCCCGG
ATGGGTGCGA GGATCGTCGA CGACTGGAAC TGGGGTTACC AGGCGTGGGC GGCGGTCAAC
GAACTGTTGA TGGACACGGA TCCGCCGCGC GAGGAGATCT CTCGCATGCT GACCTCGCCG
CAGGCGGTCT GA
 
Protein sequence
MLAIHDHHLC QETGRDAMNG EQILTVHEAA RSWQPNENAA EALAHTVEWL TRFQVCTPRA 
ERYATLSAWV YPLAPLPELE LAYDIHAFFR IYDDFTDDLA ADISRINVIS AELTGILYGR
PAKSLMGMIF HDLWARQIVS SPDQWVARVS EHWEWYFNTQ ATYAAMRDRR MDTTVEEYLE
LRLGNGAVPL CLVFGEKMNF TYLAPHIHHC TQLRLLRRLA SDIIVYCNDV YSSVRDAKRD
DPRNLISIIR DQDGCDWQEA RARCEQEMRT LDQSIHTTKQ RLDTAFDVLH FTDTERAQAR
MGARIVDDWN WGYQAWAAVN ELLMDTDPPR EEISRMLTSP QAV