| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_4311 |
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| Symbol | |
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| ID | 3907280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 5149597 |
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| End bp | 5151048 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637881639 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_483386 |
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| Protein GI | 86742986 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.654981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGTCAG CCGCACCGGT CGCCCGGGTA GGGGGGCTCA CCGCCCTGGC CGGCGCGCTG
CTCGCCGGGT CCCTGTCCGT CGGTCCCACC ACCGGATCAG CCGCGGAACT CGCCGGCAGC
GGGTCCGACC GCGCGGGCGC TGCGGTGCTC GGCGGTCTCG ATTCGGCCGC GCCGATCCCG
CAGCCCGCGG CGGTGGCGGC CCGCCTCGCC GGCCCGCTGG GTGATCCCGT TCTGGCGCGG
CCCGCGGCCT TCGTCATAGA CGCACAGTCG GGTCGGGTGC TCCTCGACGT CCGGTCCCGC
ATCCCCGTGG CACCGGCCTC CACGTTGAAA ACCGCGGTCG CCACGGCCGC GTTGACCACC
TTCCCCGACG ACCGGCTGCG GACCACCGTG GTCTACAGCC CGCCCGCGGG CGGGAACGCC
CGCACATCAG GCGGAACACT GTGGCTCGTC GGCGGCGGAG ATCCGACCCT GACCGCCTCC
ACCGCGCCCG GCGGCTATCC GGCTCTGGCC CGGCTGAGCG ATCTCGCCGC TCAGGTCCGG
GCCGCGGGTA TCACCTCGGC GGCTCGGGTG ATCGGCGATG GAGGGCTGTT CGTCGGTCCG
GACCGGGCAC CGGGATGGCG CGACAACTAC GTGACCGACG GGGACGTCGC CCCGGTCTCG
GCGCTGGAGG TCGACGCCGG ACGGTCGGCA CCGGAAGCCG TCGGACCGCG CAGCCCCACC
CCGGCCGCCG CCGCGACCAC GGCCTTCGCC GCGGCGCTCA TGACCGCCGG AGTATCCGTC
GGATCGGTGG CCACCGGCCC GGCGGACCCG GCCGCACAAC GGGTCGCGGC GGTCTACAGC
CCGCCGGTGC GGGTCTTGGT CGAACGCATG CTCACCCAGT CAGACAACGA TCTCGCCGAG
AGCCTGGGAC GGCTCGTCGC CCATCGGAGG GGCCTGCCCG CCTCGTTCAC CGGCGCCACC
CGCGCGGTGA GGGACGTCCT CGCCGAGGCG GGCCTCCCCG TCGCAGGGAT GGCACTGGCC
GACGTGAGCG GCCTGTCCAT CGCAAACCTG ATCATGCCCA TGACCCTTGT GGCCATCCTG
CGCGCCGCCG TCCTCCCCGG TCGGCCGGCG CTGCGCACCA TTCTCACGGG GCTGCCGGTA
GCCGGGTTCT CCGGTACGCT AGGTGACCGC TACACCACTG GCGACACCGC CATCGGAGCG
GGTGACGTCC GGGCGAAGAC CGGCACTCTG CACAACGTCA GCAGCCTCGC GGGCCAGCTC
GTCGACGCGG ACGGCAGGCT GCTCCTCTTC GCGTTCCTCT CGCCCGCCGA GGAGGCGGGC
AGCACCAAGG CCGCCCTCGA CCGGGCAGCC GCGGCGCTCA CCGGCTGCGG ATGCACCCCG
GCCCGGTCGA CGACCGTGGC GATCCCACCG GCAGCATCGC GCCCACCGGC AGCATCGCGC
CCACCGACCT GA
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| Protein sequence | MTSAAPVARV GGLTALAGAL LAGSLSVGPT TGSAAELAGS GSDRAGAAVL GGLDSAAPIP
QPAAVAARLA GPLGDPVLAR PAAFVIDAQS GRVLLDVRSR IPVAPASTLK TAVATAALTT
FPDDRLRTTV VYSPPAGGNA RTSGGTLWLV GGGDPTLTAS TAPGGYPALA RLSDLAAQVR
AAGITSAARV IGDGGLFVGP DRAPGWRDNY VTDGDVAPVS ALEVDAGRSA PEAVGPRSPT
PAAAATTAFA AALMTAGVSV GSVATGPADP AAQRVAAVYS PPVRVLVERM LTQSDNDLAE
SLGRLVAHRR GLPASFTGAT RAVRDVLAEA GLPVAGMALA DVSGLSIANL IMPMTLVAIL
RAAVLPGRPA LRTILTGLPV AGFSGTLGDR YTTGDTAIGA GDVRAKTGTL HNVSSLAGQL
VDADGRLLLF AFLSPAEEAG STKAALDRAA AALTGCGCTP ARSTTVAIPP AASRPPAASR
PPT
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